Your message dated Sun, 10 Dec 2017 11:00:11 +0000
with message-id <[email protected]>
and subject line Bug#879885: fixed in htslib 1.5-5
has caused the Debian Bug report #879885,
regarding htslib FTCBFS: configures for the build architecture
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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immediately.)
--
879885: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=879885
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: htslib
Version: 1.5-1
Tags: patch
User: [email protected]
Usertags: rebootstrap
htslib fails to cross build from source, because it configures for the
build architecture by failing to pass --host configure. Deferring that
task to dh_auto_configure easily fixes the cross build. Please consider
applying the attached patch.
Helmut
diff --minimal -Nru htslib-1.5/debian/changelog htslib-1.5/debian/changelog
--- htslib-1.5/debian/changelog 2017-08-04 04:56:42.000000000 +0200
+++ htslib-1.5/debian/changelog 2017-10-26 21:05:01.000000000 +0200
@@ -1,3 +1,10 @@
+htslib (1.5-1.1) UNRELEASED; urgency=medium
+
+ * Non-maintainer upload.
+ * Fix FTCBFS: Let dh_auto_configure pass --host to ./configure (Closes: #-1)
+
+ -- Helmut Grohne <[email protected]> Thu, 26 Oct 2017 21:05:01 +0200
+
htslib (1.5-1) unstable; urgency=medium
* Team upload
diff --minimal -Nru htslib-1.5/debian/rules htslib-1.5/debian/rules
--- htslib-1.5/debian/rules 2017-08-04 04:56:19.000000000 +0200
+++ htslib-1.5/debian/rules 2017-10-26 21:04:59.000000000 +0200
@@ -19,7 +19,7 @@
override_dh_auto_configure:
autoconf
- ./configure --enable-libcurl
+ dh_auto_configure -- --enable-libcurl
override_dh_auto_build:
dh_auto_build -- \
--- End Message ---
--- Begin Message ---
Source: htslib
Source-Version: 1.5-5
We believe that the bug you reported is fixed in the latest version of
htslib, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated htslib package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
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Hash: SHA512
Format: 1.8
Date: Sun, 10 Dec 2017 09:00:27 +0100
Source: htslib
Binary: libhts2 libhts-dev libhts-private-dev htslib-test tabix
Architecture: source all amd64
Version: 1.5-5
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
htslib-test - Test data for HTSlib
libhts-dev - development files for the HTSlib
libhts-private-dev - private development files for the HTSlib (use with care)
libhts2 - C library for high-throughput sequencing data formats
tabix - generic indexer for TAB-delimited genome position files
Closes: 879885 881170 881359
Changes:
htslib (1.5-5) unstable; urgency=medium
.
[ Graham Inggs ]
* Extend i386 fix to hurd and kfreebsd
.
[ Helmut Grohne ]
* Fix FTCBFS: Let dh_auto_configure pass --host to ./configure
Closes: #879885
.
[ Andreas Tille ]
* Fix issues with private cram headers
- Provide cram headers in separate package libhts-private-dev.install
Closes: #881170
- Deactivate fix_pkg-config.patch
Closes: #881359
* Standards-Version: 4.1.2
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