Your message dated Wed, 11 Dec 2019 15:19:48 +0000
with message-id <[email protected]>
and subject line Bug#931784: fixed in nanopolish 0.11.2-1
has caused the Debian Bug report #931784,
regarding nanopolish: Port to Python3 needed
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
931784: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=931784
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: nanopolish
Version: 0.11.0-2
Severity: important
The code needs to be ported to Python3
-- System Information:
Debian Release: 10.0
APT prefers testing
APT policy: (501, 'testing'), (50, 'buildd-unstable'), (50, 'unstable'), (5,
'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 4.19.0-5-amd64 (SMP w/4 CPU cores)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8),
LANGUAGE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Versions of packages nanopolish depends on:
ii libc6 2.28-10
ii libgcc1 1:8.3.0-6
ii libgomp1 8.3.0-6
ii libhdf5-103 1.10.4+repack-10
ii libhts2 1.9-11
ii libstdc++6 8.3.0-6
ii python 2.7.16-1
ii zlib1g 1:1.2.11.dfsg-1
Versions of packages nanopolish recommends:
ii python-biopython 1.73+dfsg-1
ii python-pysam 0.15.2+ds-2
Versions of packages nanopolish suggests:
ii make 4.2.1-1.2
ii perl 5.28.1-6
-- no debconf information
--- End Message ---
--- Begin Message ---
Source: nanopolish
Source-Version: 0.11.2-1
We believe that the bug you reported is fixed in the latest version of
nanopolish, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated nanopolish package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
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Hash: SHA256
Format: 1.8
Date: Wed, 11 Dec 2019 15:48:48 +0100
Source: nanopolish
Binary: nanopolish
Architecture: source
Version: 0.11.2-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
nanopolish - consensus caller for nanopore sequencing data
Closes: 931784 937105
Changes:
nanopolish (0.11.2-1) unstable; urgency=medium
.
[ Michael R. Crusoe ]
* New upstream release
Closes: #931784, #937105
* debhelper-compat 12
* Added patch to fixed #! for the python scripts
* Set upstream metadata fields: Repository.
.
[ Andreas Tille ]
* Standards-Version: 4.4.1
* Set upstream metadata fields: Bug-Database, Repository-Browse.
* Unify autopkgtest
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