Your message dated Sat, 11 Jan 2020 06:19:14 +0000
with message-id <[email protected]>
and subject line Bug#948597: fixed in fasta3 36.3.8h-2
has caused the Debian Bug report #948597,
regarding fasta3-doc: missing Breaks+Replaces: fasta3 (<< 36.3.8h)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
948597: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=948597
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: fasta3-doc
Version: 36.3.8h-1
Severity: serious
User: [email protected]
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#overwriting-files-and-replacing-packages-replaces

>From the attached log (scroll to the bottom...):

  Preparing to unpack .../fasta3-doc_36.3.8h-1_all.deb ...
  Unpacking fasta3-doc (36.3.8h-1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/fasta3-doc_36.3.8h-1_all.deb (--unpack):
   trying to overwrite '/usr/share/doc/fasta3/fasta_guide.pdf', which is also 
in package fasta3 36.3.8g-1
  dpkg-deb: error: paste subprocess was killed by signal (Broken pipe)
  Errors were encountered while processing:
   /var/cache/apt/archives/fasta3-doc_36.3.8h-1_all.deb


cheers,

Andreas

Attachment: fasta3=36.3.8g-1_fasta3-doc=36.3.8h-1.log.gz
Description: application/gzip


--- End Message ---
--- Begin Message ---
Source: fasta3
Source-Version: 36.3.8h-2

We believe that the bug you reported is fixed in the latest version of
fasta3, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated fasta3 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])


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Hash: SHA256

Format: 1.8
Date: Sat, 11 Jan 2020 06:55:15 +0100
Source: fasta3
Binary: fasta3 fasta3-dbgsym fasta3-doc
Architecture: source amd64 all
Version: 36.3.8h-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
 fasta3     - tools for searching collections of biological sequences
 fasta3-doc - user guide for FASTA tools
Closes: 948597
Changes:
 fasta3 (36.3.8h-2) unstable; urgency=medium
 .
   * Team upload.
   * Breaks+Replaces: fasta3 (<< 36.3.8h)
     Closes: #948597
   * Remove trailing whitespace in debian/copyright
   * Remove trailing whitespace in debian/rules
   * Trim trailing whitespace.
   * Use secure URI in Homepage field.
   * Fix regexp in d/copyright
   * Package fasta3-doc in section non-free/doc
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Files:
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fasta3_36.3.8h-2.dsc
 e7931ff101bccb79eaf7f4e0249d3d17 4592 non-free/science optional 
fasta3_36.3.8h-2.debian.tar.xz
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fasta3-dbgsym_36.3.8h-2_amd64.deb
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fasta3-doc_36.3.8h-2_all.deb
 0f7f775ad2d606cb167655c713c9c26f 6021 non-free/science optional 
fasta3_36.3.8h-2_amd64.buildinfo
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fasta3_36.3.8h-2_amd64.deb

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