Your message dated Fri, 17 Apr 2020 20:35:16 +0000
with message-id <[email protected]>
and subject line Bug#957415: fixed in lagan 2.0-6
has caused the Debian Bug report #957415,
regarding lagan: ftbfs with GCC-10
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
957415: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=957415
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:lagan
Version: 2.0-5
Severity: normal
Tags: sid bullseye
User: [email protected]
Usertags: ftbfs-gcc-10
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-10/g++-10, but succeeds to build with gcc-9/g++-9. The
severity of this report will be raised before the bullseye release,
so nothing has to be done for the buster release.
The full build log can be found at:
http://people.debian.org/~doko/logs/gcc10-20200225/lagan_2.0-5_unstable_gcc10.log
The last lines of the build log are at the end of this report.
To build with GCC 10, either set CC=gcc-10 CXX=g++-10 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t=experimental install g++
Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-10/porting_to.html
[...]
multial.c:563:10: warning: ‘matchcache’ is static but used in inline function
‘scoreOpp’ which is not static
563 | return matchcache[v(other->cnts[0][ow]) |
| ^~~~~~~~~~
multial.c:556:5: warning: ‘gapcache’ is static but used in inline function
‘matchscore’ which is not static
556 | gapcache[v(a->cnts[CNTS_GS][ai] + b->cnts[CNTS_GS][bi]) |
| ^~~~~~~~
multial.c:552:5: warning: ‘matchcache’ is static but used in inline function
‘matchscore’ which is not static
552 | matchcache[v(a->cnts[0][ai] + b->cnts[0][bi]) |
| ^~~~~~~~~~
gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-Wformat -Werror=format-security -O3 -o ../utils/bin2mf utils/bin2mf.c
-Wl,-z,relro
gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-Wformat -Werror=format-security -O3 -o ../utils/bin2bl utils/bin2bl.c
-Wl,-z,relro
skiplist.c: In function ‘printSLE’:
skiplist.c:12:19: warning: format ‘%x’ expects argument of type ‘unsigned int’,
but argument 3 has type ‘void *’ [-Wformat=]
12 | printf(" %d %x\n", tbp->index, tbp->myelem);
| ~^ ~~~~~~~~~~~
| | |
| unsigned int void *
| %p
gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-Wformat -Werror=format-security -O3 -o ../utils/cextract utils/cextract.c
-Wl,-z,relro
gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-Wformat -Werror=format-security -O3 -o ../utils/cstat utils/cstat.c
-Wl,-z,relro
utils/cstat.c: In function ‘cntlets’:
utils/cstat.c:51:10: warning: implicit declaration of function ‘isspace’
[-Wimplicit-function-declaration]
51 | if (!isspace(currchar)) {
| ^~~~~~~
utils/cstat.c:52:18: warning: implicit declaration of function ‘toupper’
[-Wimplicit-function-declaration]
52 | currchar = toupper(currchar);
| ^~~~~~~
gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-Wformat -Werror=format-security -O3 -o ../utils/contigorder
utils/contigorder.c -Wl,-z,relro
utils/contigorder.c: In function ‘getFileInfo’:
utils/contigorder.c:15:57: warning: format ‘%s’ expects a matching ‘char *’
argument [-Wformat=]
15 | fprintf (stderr, "contigorder: Error opening file: %s\n");
| ~^
| |
| char *
utils/contigorder.c:26:18: warning: unknown conversion type character ‘&’ in
format [-Wformat=]
26 | fscanf (file, "%&d", &dummy);
| ^
utils/contigorder.c:26:16: warning: too many arguments for format
[-Wformat-extra-args]
26 | fscanf (file, "%&d", &dummy);
| ^~~~~
utils/contigorder.c: In function ‘getScores’:
utils/contigorder.c:52:57: warning: format ‘%s’ expects a matching ‘char *’
argument [-Wformat=]
52 | fprintf (stderr, "contigorder: Error opening file: %s\n");
| ~^
| |
| char *
/usr/bin/ld: /tmp/ccABy6FA.o:./src/thrtrie.h:5: multiple definition of
`indeces'; /tmp/cc1mHUWL.o:./src/thrtrie.h:5: first defined here
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile:14: ../chaos] Error 1
make[2]: *** Waiting for unfinished jobs....
skiplist.c: In function ‘printSLE’:
skiplist.c:12:19: warning: format ‘%x’ expects argument of type ‘unsigned int’,
but argument 3 has type ‘void *’ [-Wformat=]
12 | printf(" %d %x\n", tbp->index, tbp->myelem);
| ~^ ~~~~~~~~~~~
| | |
| unsigned int void *
| %p
skiplist.c: In function ‘printSLE’:
skiplist.c:12:19: warning: format ‘%x’ expects argument of type ‘unsigned int’,
but argument 3 has type ‘void *’ [-Wformat=]
12 | printf(" %d %x\n", tbp->index, tbp->myelem);
| ~^ ~~~~~~~~~~~
| | |
| unsigned int void *
| %p
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
dh_auto_build: error: cd src && make -j4 "INSTALL=install --strip-program=true"
returned exit code 2
make[1]: *** [debian/rules:9: override_dh_auto_build] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:6: build] Error 2
dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2
--- End Message ---
--- Begin Message ---
Source: lagan
Source-Version: 2.0-6
Done: Nilesh Patra <[email protected]>
We believe that the bug you reported is fixed in the latest version of
lagan, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Nilesh Patra <[email protected]> (supplier of updated lagan package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 17 Apr 2020 20:39:11 +0200
Source: lagan
Architecture: source
Version: 2.0-6
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Nilesh Patra <[email protected]>
Closes: 957415
Changes:
lagan (2.0-6) unstable; urgency=medium
.
* Team upload
.
[ Nilesh Patra ]
* Add patch for GCC-10
Closes: #957415
.
[ Andreas Tille ]
* Standards-Version: 4.5.0 (routine-update)
* debhelper-compat 12 (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
Checksums-Sha1:
93042ec454da798fe7f668ddeb6b47b44d6aff68 1954 lagan_2.0-6.dsc
4cdf9e15a9f9e383eeccf284809490d10b8e7912 7908 lagan_2.0-6.debian.tar.xz
866373fa6a9c6d17304c81d7ad26c9d9a681350a 5737 lagan_2.0-6_amd64.buildinfo
Checksums-Sha256:
177a202953da1748ea49f07c65bbf4e15476857dffe61c40226793fbf7412f1b 1954
lagan_2.0-6.dsc
391556279505692300c6a6eb7f5f867946ae58940ab51741b3dbfc966b946ff9 7908
lagan_2.0-6.debian.tar.xz
77f239cfc704eb0332ca8cb1afd78264cd6c65dcfed6cbadce867b0036b35695 5737
lagan_2.0-6_amd64.buildinfo
Files:
76109349f9e853304fe8374e5ebdd93f 1954 science optional lagan_2.0-6.dsc
c5fb5ba888010a8ed47845a511e6774a 7908 science optional
lagan_2.0-6.debian.tar.xz
afe9ecf52252ffe94423afd2f3175309 5737 science optional
lagan_2.0-6_amd64.buildinfo
-----BEGIN PGP SIGNATURE-----
iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl6aBhMRHHRpbGxlQGRl
Ymlhbi5vcmcACgkQV4oElNHGRtE51g//bGL57AXsQICk+iEZZGLy0+7oWPzKb/Q4
4WMMZla8dGVLPhWgPvsU7T/bZNNqSIZd3YbSoCfR2CgXJAI9mKFDtMrrEya/PEBu
Fmu6HlDErm58tf+YGQWUtKpj7UPz6Cx205NDFzhXqVRL7arAtmWBR9VJNNBuurex
T2N+4htZtSTw0E9UcwbWG2KbmXcxFFn3Mn97vlCVMAuu4A0ytwPLPFpQj2aQBQ/8
13m5fsGA6IUCJpi/kJOyQhsRP+8AARaZ1HT8Qe7qhYaexFasWQtNPXymLuUb2/ns
VE84IWQm2dtN9uAZdvFX9qIGj2y8YrpKT/my8aMCcRqZYm1SD473MvuMChC3nVcT
V99l8lQS0sQbOkrkV0RQAeemoftUcGH7Dcu06zb4RF5L9CLboPrL0SzpzdnHmwli
KonVYrhgIBGN0EAGoHHJ0g5hFYsdL34IfxY1LysFln8HmOC8HNuGmKETNXf1dgSU
rAJy85DOxD+YkWW2LTBDDDiWGti43UrmCuPN6vA5/v6aXf0eMXmAVlMe6Afx00WQ
AcplyZT5i59lhxgo5a/jsuVUtXbXK+asBZSynLMprw1AVCPU9PLfsmGHmx7wge2P
SN1/sZEQJlYZrvovA6kfI2Nemat7IzfX0Jcdy7/w+Oy0uYlyB70n5dPon4Rrp17J
Sn67X/wH9aA=
=0iml
-----END PGP SIGNATURE-----
--- End Message ---