Your message dated Mon, 14 Dec 2020 09:05:15 +0000
with message-id <[email protected]>
and subject line Bug#976614: fixed in r-bioc-deseq2 1.30.0+dfsg-3
has caused the Debian Bug report #976614,
regarding r-bioc-deseq2: autopkgtest dependency check plays bad in Debian
migration setup
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
976614: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=976614
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: r-bioc-deseq2
Version: 1.30.0+dfsg-2
Severity: serious
X-Debbugs-CC: [email protected]
User: [email protected]
Usertags: issue
Dear maintainer,
Your package has an autopkgtest, great. However, apparently you have
been waiting for a test dependency to become available and have
implemented a check to not forget to remove the overwrite:
https://sources.debian.org/src/r-bioc-deseq2/1.30.0+dfsg-2/debian/tests/run-unit-test/#L14
echo "FIXME: Do not delete tests requiring glmGamPoi once
r-bioc-glmgampoi is available"
if apt-cache show r-bioc-glmgampoi > /dev/null 2>/dev/null ; then
echo "Package r-bioc-glmgampoi is available now - do not remove the
test requiring it any more"
exit -1
fi
However, this plays badly now in the default Debian migration software
as can be seen on ppc64el. r-bioc-glmgampoi fails to migrate, so in a
pure testing environment your test passes, but with unstable added
(which we do to test uploads of your dependencies) the test fails. Your
test has been blocking e.g. glibc and gcc-10 from migrating to testing
for no good reason.
Please fix your test.
Paul
OpenPGP_signature
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Source: r-bioc-deseq2
Source-Version: 1.30.0+dfsg-3
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
r-bioc-deseq2, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated r-bioc-deseq2 package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
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Hash: SHA256
Format: 1.8
Date: Mon, 14 Dec 2020 09:06:09 +0100
Source: r-bioc-deseq2
Architecture: source
Version: 1.30.0+dfsg-3
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 976614
Changes:
r-bioc-deseq2 (1.30.0+dfsg-3) unstable; urgency=medium
.
* r-bioc-glmgampoi is available now - just enable its usage in tests
Closes: #976614
* Standards-Version: 4.5.1 (routine-update)
* Test-Depends: r-bioc-tximport
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