Your message dated Sun, 27 Dec 2020 17:19:27 +0000
with message-id <[email protected]>
and subject line Bug#978022: fixed in openmpi 4.1.0-2
has caused the Debian Bug report #978022,
regarding libopenmpi3 Runtime failure opal_pmix_base_select failed
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
978022: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=978022
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: libopenmpi3
Version: 3.1.3-11
Severity: serious
Even with the fixed libpmix2_4.0.0~rc1-2, I am getting runtime failures
trying to run MPI programs, e.g. the nwchem autopkgtests all fail like
this:
| Running tests/water/water_md
|
| cleaning scratch
| copying input and verified output files
| running nwchem (/usr/bin/nwchem) with 1 processors
|
| NWChem execution failed
|[kohn:13218] [[5127,0],0] ORTE_ERROR_LOG: Not found in file
../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
|--------------------------------------------------------------------------
|It looks like orte_init failed for some reason; your parallel process is
|likely to abort. There are many reasons that a parallel process can
|fail during orte_init; some of which are due to configuration or
|environment problems. This failure appears to be an internal failure;
|here's some additional information (which may only be relevant to an
|Open MPI developer):
|
| opal_pmix_base_select failed
| --> Returned value Not found (-13) instead of ORTE_SUCCESS
|--------------------------------------------------------------------------
Not sure whether this is libopenmpi3, openmpi-bin, libpmix2 or something
else, so please reassign as needed. But at least the openmpi excuses is
full of ci.debian.net regressions:
https://qa.debian.org/excuses.php?package=openmpi
Or is there something needed on the application side, like a new
environment variable or library to be linked in?
Michael
--- End Message ---
--- Begin Message ---
Source: openmpi
Source-Version: 4.1.0-2
Done: Alastair McKinstry <[email protected]>
We believe that the bug you reported is fixed in the latest version of
openmpi, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Alastair McKinstry <[email protected]> (supplier of updated openmpi package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sun, 27 Dec 2020 14:38:05 +0000
Source: openmpi
Architecture: source
Version: 4.1.0-2
Distribution: unstable
Urgency: medium
Maintainer: Alastair McKinstry <[email protected]>
Changed-By: Alastair McKinstry <[email protected]>
Closes: 978022 978066 978203 978308
Changes:
openmpi (4.1.0-2) unstable; urgency=medium
.
* Update d/watch file
* Use internal pmix until pmix 4.0 supported.
Closes: #978022, #978308, #978203, #978066
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