Your message dated Wed, 10 Feb 2021 10:18:37 +0000
with message-id <[email protected]>
and subject line Bug#982098: fixed in python-anndata 0.7.5+ds-3
has caused the Debian Bug report #982098,
regarding python-anndata: autopkgtest failure on 32bit
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
982098: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=982098
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: python-anndata
Version: 0.7.5+ds-2
Severity: serious
https://tracker.debian.org/pkg/python-anndata
Migration status for python-anndata (- to 0.7.5+ds-2): BLOCKED:
Rejected/violates migration policy/introduces a regression
Issues preventing migration:
autopkgtest for python-anndata/0.7.5+ds-2: amd64: Pass, arm64: Pass, armhf:
Regression ♻ , i386: Regression ♻ , ppc64el: Pass
...
=================================== FAILURES ===================================
___________________ test_set_dataframe[<lambda>-False-int32] ___________________
homogenous = False, df = <function <lambda> at 0xf1d74148>
dtype = <class 'numpy.int32'>
@pytest.mark.parametrize(
"df,homogenous,dtype",
[
(lambda: gen_typed_df_t2_size(*X.shape), True, np.object_),
(lambda: pd.DataFrame(X ** 2), False, np.int_),
],
)
def test_set_dataframe(homogenous, df, dtype):
adata = AnnData(X)
if homogenous:
with pytest.warns(UserWarning, match=r"Layer 'df'.*dtype object"):
adata.layers["df"] = df()
else:
with pytest.warns(None) as warnings:
adata.layers["df"] = df()
assert not len(warnings)
assert isinstance(adata.layers["df"], np.ndarray)
> assert np.issubdtype(adata.layers["df"].dtype, dtype)
E AssertionError: assert False
E + where False = <function issubdtype at 0xf60991d8>(dtype('int32'),
<class 'numpy.int32'>)
E + where <function issubdtype at 0xf60991d8> = np.issubdtype
E + and dtype('int32') = array([[ 1, 4, 9],\n [16, 25,
36],\n [49, 64, 81]], dtype=int32).dtype
/usr/lib/python3/dist-packages/anndata/tests/test_layers.py:62: AssertionError
...
Removing this assert in line 62 fixes the build on i386 for me,
which might be the way forward for getting the package into bullseye.
--- End Message ---
--- Begin Message ---
Source: python-anndata
Source-Version: 0.7.5+ds-3
Done: Michael R. Crusoe <[email protected]>
We believe that the bug you reported is fixed in the latest version of
python-anndata, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael R. Crusoe <[email protected]> (supplier of updated python-anndata
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 10 Feb 2021 10:52:56 +0100
Source: python-anndata
Architecture: source
Version: 0.7.5+ds-3
Distribution: unstable
Urgency: high
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Michael R. Crusoe <[email protected]>
Closes: 982098
Changes:
python-anndata (0.7.5+ds-3) unstable; urgency=high
.
* Team upload.
* debian/patches/32bit_test_fail_skip: fix FTBFS on 32bit archs
Closes: #982098
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