Your message dated Sat, 20 Feb 2021 13:31:12 +0100
with message-id <[email protected]>
and subject line Re: Bug#980765: Bug#980765: eigensoft: absolute path to
fixgreen in /usr/bin/ploteig
has caused the Debian Bug report #980765,
regarding eigensoft: absolute path to fixgreen in /usr/bin/ploteig
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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980765: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=980765
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--- Begin Message ---
Package: eigensoft
Version: 6.1.4+dfsg-1
Control: fixed -1 7.2.1+dfsg-1
X-Debbugs-Cc: Tony Travis <[email protected]>, Debian Med
Project List <[email protected]>
Tony Travis kirjoitti 21.1.2021 klo 21.39:
> Hi,
>
> I still struggle to know the best way to report errors I find running
> Debian-Med packages under Ubuntu, so I'm just going to report it here.
>
> There is an absolute path to "fixgreen" in the "ploteig" script in the
> "eigensoft" package. Sorry I'm not a true Debianista and before I get told
> off the Debian reporting tools don't work under Ubuntu. I obtained a copy of
> "fixgreen" from the EIG5.0.2.tgz distribution tarball.
>
> Thanks again for all your hard work maintaining Debian-Med,
>
> Tony.
>
> root@wildcat:/usr/local/src/bioinformatics/EIGENSOFT/EIG-6.1.4/bin# diff
> -Naur ploteig /usr/bin/ploteig
> --- ploteig 2016-09-07 16:00:02.000000000 +0100
> +++ /usr/bin/ploteig 2021-01-21 19:24:39.535788738 +0000
> @@ -1,4 +1,8 @@
> -#!/usr/local/bin/perl -w
> +#!/usr/bin/perl -w
> +#@(#)ploteig 2021-01-21 last modified by A.J.Travis
> +#
> +# Removed absolute path to "fixgreen"
> +#
>
> ### ploteig -i eigfile -p pops -c a:b [-t title] [-s stem] [-o outfile] [-x]
> [-k] [-y] [-z sep] -r colorstring -m xmul -n ymul
> use Getopt::Std ;
> @@ -135,7 +139,7 @@
> $psfile =~ s/xtxt/ps/ ;
> }
> system "gnuplot < $gnfile > $psfile" ;
> -system "/home/np29/bin/fixgreen $psfile" ;
> +system "fixgreen $psfile" ;
> system "ps2pdf $psfile " ;
> }
> unlink (@T) unless $keepflag ;
The bug system works by email, so I am forwarding this for filing there.
I'll also mark the bug fixed in a certain version because it looks like
the ploteig script disappeared at that point.
Even on Ubuntu, the reportbug package is supposed to work, sorry to hear
if does not. The command to use would be "reportbug -B debian eigensoft".
--
Juhani Numminen
--- End Message ---
--- Begin Message ---
Closed, thanks for verifying, Andreas.
On Sat, Feb 20, 2021 at 01:17:04PM +0100, Sascha Steinbiss wrote:
> Hi,
>
> > The bug system works by email, so I am forwarding this for filing there.
> > I'll also mark the bug fixed in a certain version because it looks like
> > the ploteig script disappeared at that point.
>
> Can this bug be closed then? I just checked the latest version (which is
> even in buster) and there seems to be no sign of ploteig script; I also
> did a quick grep through the source to confirm there are no more
> hard-coded references to np29's home directory.
>
> Cheers
> Sascha
>
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