Your message dated Fri, 04 Feb 2022 16:34:48 +0100 with message-id <[email protected]> and subject line Re: Bug#980751: petsc: breaks multiple autopkgtests: undefined reference to 'MPIU_SUM' has caused the Debian Bug report #980751, regarding petsc: breaks multiple autopkgtests: undefined reference to 'MPIU_SUM' to be marked as done.
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--- Begin Message ---Source: petsc Version: 3.14.3+dfsg1-1 Severity: serious X-Debbugs-CC: [email protected] User: [email protected] Usertags: breaks Control: affects -1 deal.ii dolfin meshr slepc4py Hi Maintainer The recent upload of petsc 3.14.3+dfsg1-1 appears to have caused the autopkgtests of at least deal.ii [1], dolfin [2], mshr [3] and slepc4py [4] to fail. I've copied what I hope is the relevant portion of slepc4py's log below. Regards Graham [1] https://ci.debian.net/packages/d/deal.ii/testing/amd64/ [2] https://ci.debian.net/packages/d/dolfin/testing/amd64/ [3] https://ci.debian.net/packages/m/mshr/testing/amd64/ [4] https://ci.debian.net/packages/s/slepc4py/testing/amd64/ Run 64-bit demos (single processor) with python3 make: Entering directory '/tmp/autopkgtest-lxc.x0up_swz/downtmp/build.ctJ/src/test-demos' python3 ex1.py Traceback (most recent call last): File "/tmp/autopkgtest-lxc.x0up_swz/downtmp/build.ctJ/src/test-demos/ex1.py", line 2, in <module> slepc4py.init(sys.argv) File "/usr/lib/slepc64/lib/python3/dist-packages/slepc4py/__init__.py", line 41, in init SLEPc = slepc4py.lib.ImportSLEPc(arch) File "/usr/lib/slepc64/lib/python3/dist-packages/slepc4py/lib/__init__.py", line 34, in ImportSLEPc return Import('slepc4py', 'SLEPc', path, arch) File "/usr/lib/petsc64/lib/python3/dist-packages/petsc4py/lib/__init__.py", line 73, in Import module = import_module(pkg, name, path, arch) File "/usr/lib/petsc64/lib/python3/dist-packages/petsc4py/lib/__init__.py", line 58, in import_module with f: return imp.load_module(fullname, f, fn, info) File "/usr/lib/python3.9/imp.py", line 242, in load_module return load_dynamic(name, filename, file) File "/usr/lib/python3.9/imp.py", line 342, in load_dynamic return _load(spec) File "<frozen importlib._bootstrap>", line 711, in _load File "<frozen importlib._bootstrap>", line 666, in _load_unlocked File "<frozen importlib._bootstrap>", line 565, in module_from_spec File "<frozen importlib._bootstrap_external>", line 1108, in create_module File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed ImportError: /lib/x86_64-linux-gnu/libslepc64_real.so.3.14: undefined symbol: MPIU_SUM make: *** [makefile:11: run_ex1] Error 1 make: Leaving directory '/tmp/autopkgtest-lxc.x0up_swz/downtmp/build.ctJ/src/test-demos' autopkgtest [03:53:38]: test run-demos-64: -----------------------] autopkgtest [03:53:38]: test run-demos-64: - - - - - - - - - - results - - - - - - - - - - run-demos-64 FAIL non-zero exit status 2
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--- Begin Message --- dolfin tests have continued to pass consistently, including with petsc 3.15, so closing this bug now.
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