Your message dated Mon, 18 Jul 2022 19:22:08 +0000 with message-id <[email protected]> and subject line Bug#1013275: fixed in toil 5.6.0-7 has caused the Debian Bug report #1013275, regarding toil: FTBFS with Python 3.10 only to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 1013275: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1013275 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: toil Version: 5.6.0-6 Severity: important Tags: ftbfs Hi Maintainer Toil hardcodes python3.9 and will FTBFS when Python 3.10 is the only supported Python version. I've copied what I hope is the relevant part of the log below, which shows the python3.10 tests being attempted with python3.9. Regards Graham =================================== FAILURES =================================== ___________________ ToilDebugFileTest.testFetchJobStoreFiles ___________________ Traceback (most recent call last): File "/<<PKGBUILDDIR>>/src/toil/test/utils/toilDebugTest.py", line 31, in setUp subprocess.check_call([python, os.path.abspath('src/toil/test/utils/ABCWorkflowDebug/debugWorkflow.py')]) File "/usr/lib/python3.10/subprocess.py", line 364, in check_call retcode = call(*popenargs, **kwargs) File "/usr/lib/python3.10/subprocess.py", line 345, in call with Popen(*popenargs, **kwargs) as p: File "/usr/lib/python3.10/subprocess.py", line 966, in __init__ self._execute_child(args, executable, preexec_fn, close_fds, File "/usr/lib/python3.10/subprocess.py", line 1842, in _execute_child raise child_exception_type(errno_num, err_msg, err_filename) FileNotFoundError: [Errno 2] No such file or directory: 'python3.9'
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--- Begin Message ---Source: toil Source-Version: 5.6.0-7 Done: Andreas Tille <[email protected]> We believe that the bug you reported is fixed in the latest version of toil, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <[email protected]> (supplier of updated toil package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Mon, 18 Jul 2022 17:39:37 +0200 Source: toil Architecture: source Version: 5.6.0-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Andreas Tille <[email protected]> Closes: 1013275 Changes: toil (5.6.0-7) unstable; urgency=medium . * Team upload. * Packaging update * Standards-Version: 4.6.1 (routine-update) * Remove trailing whitespace in debian/changelog (routine-update) * Drop unnecessary dependency on build-essential. * Make sure the doc applies to Debian installations with Python3 * Update lintian-overrides * Set python3.10 instead of python3.9 in setting_version.patch Closes: #1013275 Checksums-Sha1: 79c30dbc91a521cdaf1b719b6a63931cf9a4fdfc 2522 toil_5.6.0-7.dsc 09f1c7feec436d082b44e24a5ca60efe76c668ce 15512 toil_5.6.0-7.debian.tar.xz b9a90fc823ebfc17c49ae8f12f305cf290879def 10679 toil_5.6.0-7_amd64.buildinfo Checksums-Sha256: 3f8b216e218f5930e9a5274e5ac7ce0c2e7f1e41a2ef5e4aaade491f31815778 2522 toil_5.6.0-7.dsc e96b50e75828e45e161935a2e1340b27862f0894456a0dd143501a8358fd7058 15512 toil_5.6.0-7.debian.tar.xz b9d3ead5723c95d11350e640a4d5c6404080987292ffbb56dc21eedd99a7ab09 10679 toil_5.6.0-7_amd64.buildinfo Files: ba8dc109e8ac385d1386dc82fac7cbee 2522 net optional toil_5.6.0-7.dsc d22934b61fb6017f518d4fc272a42965 15512 net optional toil_5.6.0-7.debian.tar.xz f90250a0a9d3ef54f48b7cc0c4db4509 10679 net optional toil_5.6.0-7_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmLVr4ERHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGMiA//SpU4HZpLD3Hl0wPWSWQiqMyTsvVhcTFt 13wMmN6YsX+DkaodsHvfTCrcS8Wl9S74QHbOCixTlxfw1ViKuSpgy2bK5Q/hajmO WXWP6TT4NZj5m9Mjlsjb8yuWeBUXHyqOsvF5Qfe7W//EGJEvRLviC7DADkws6L8N tQTi1roLG+an9wFuXtWiYfrdzURREk7lzGzQVawS7+ngfPe4aMURZpaxmG+XxrBf 6g02zvTXSru9IAnLV7JPd2tVKwt4G3zkDeuRW6zm4pKrTOQcr8yzPYcJTK6f+QQr HoZ51jyD2rj0bFFU67XG39LVXQi16FNjmSbafveK5Q+X8tFRZOPV8JpmvAkNDsNq NflQf9ZzEx8R0ah8j4fzqVqLoF0jqbOk8OCBduTLf0OiAMlffqFvM6qrEemhL0R7 1fey7a5GrObMgmUkWFDyB5F6Gn7Gd81zW46PvwJN8P51zadOx7x+cJhOsGPp39kZ PFXkBYG60m+J3H8ZKIdCwnG5807OmD55Hd3VAeqYRSNDNqRS13VGzPPVvL9xicZd ZX8AYyF3LN21FE7ppghfMFOyxf3xdf5ZkSMhden0UMTm59sDsreX90APrWWHQ8eS 6FxvQrh5Ei68dVAC5IgQKcZyYWFMGG5H+3QnA0ll1r4aOqZDYk8hQJfy6hD3OKr6 ZjIPmipzuzk= =ZTDT -----END PGP SIGNATURE-----
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