Your message dated Wed, 07 Sep 2022 15:31:02 +0200
with message-id <[email protected]>
and subject line Re: Bug#1017284: fenics-dolfinx: FTBFS:
CheckSymbolExists.c:8:19: error: ‘PETSC_USE_COMPLEX’ undeclared (first use in
this function); did you mean ‘PETSC_HAVE_COMPLEX’?
has caused the Debian Bug report #1017284,
regarding fenics-dolfinx: FTBFS: CheckSymbolExists.c:8:19: error:
‘PETSC_USE_COMPLEX’ undeclared (first use in this function); did you mean
‘PETSC_HAVE_COMPLEX’?
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
1017284: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1017284
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: fenics-dolfinx
Version: 1:0.4.1-4
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs
User: [email protected]
Usertags: ftbfs-20220813 ftbfs-bookworm
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> /usr/bin/cc -I/usr/lib/petscdir/petsc3.16/x86_64-linux-gnu-real/include -g
> -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat
> -Wdate-time -D_FORTIFY_SOURCE=2 -o
> CMakeFiles/cmTC_d1fc9.dir/CheckSymbolExists.c.o -c
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu-real/CMakeFiles/CMakeTmp/CheckSymbolExists.c
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu-real/CMakeFiles/CMakeTmp/CheckSymbolExists.c:
> In function ‘main’:
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu-real/CMakeFiles/CMakeTmp/CheckSymbolExists.c:8:19:
> error: ‘PETSC_USE_COMPLEX’ undeclared (first use in this function); did you
> mean ‘PETSC_HAVE_COMPLEX’?
> 8 | return ((int*)(&PETSC_USE_COMPLEX))[argc];
> | ^~~~~~~~~~~~~~~~~
> | PETSC_HAVE_COMPLEX
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu-real/CMakeFiles/CMakeTmp/CheckSymbolExists.c:8:19:
> note: each undeclared identifier is reported only once for each function it
> appears in
> gmake[3]: *** [CMakeFiles/cmTC_d1fc9.dir/build.make:78:
> CMakeFiles/cmTC_d1fc9.dir/CheckSymbolExists.c.o] Error 1
> gmake[3]: Leaving directory
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu-real/CMakeFiles/CMakeTmp'
> gmake[2]: *** [Makefile:127: cmTC_d1fc9/fast] Error 2
> gmake[2]: Leaving directory
> '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu-real/CMakeFiles/CMakeTmp'
>
>
> File
> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu-real/CMakeFiles/CMakeTmp/CheckSymbolExists.c:
> /* */
> #include <petscsystypes.h>
>
> int main(int argc, char** argv)
> {
> (void)argv;
> #ifndef PETSC_USE_COMPLEX
> return ((int*)(&PETSC_USE_COMPLEX))[argc];
> #else
> (void)argc;
> return 0;
> #endif
> }
> dh_auto_configure: error: cd obj-x86_64-linux-gnu-real && cmake
> -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None
> -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var
> -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF
> -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON
> -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run
> -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles"
> -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D
> CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D
> CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D
> DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D
> HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D
> DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D
> DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D
> MPIEXEC_PARAMS:STRING=--oversubscribe -D CMAKE_CXX_FLAGS:STRING=-fpermissive
> -D "DOLFINX_EXTRA_CXX_FLAGS:STRING=-g -O2
> -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat
> -Werror=format-security" -DXTENSOR_USE_XSIMD=ON /<<PKGBUILDDIR>>/cpp ..
> returned exit code 1
> make[1]: *** [debian/rules:144: override_dh_auto_configure] Error 25
The full build log is available from:
http://qa-logs.debian.net/2022/08/13/fenics-dolfinx_0.4.1-4_unstable.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20220813;[email protected]
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20220813&[email protected]&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
This bug isn't being reproduced. dolfinx both 0.4.0 and 0.5.0 is
building fine. I guess it was a transient bug caught in the middle of a
transition, or possibly fixed with the rebuild for scotch 7.0.1-3.
Hence closing the bug now.
--- End Message ---
