Your message dated Thu, 06 Jul 2023 13:20:19 +0000 with message-id <[email protected]> and subject line Bug#1039657: fixed in r-cran-pammtools 0.5.91-2 has caused the Debian Bug report #1039657, regarding r-cran-pammtools: autopkgtest failure with r-base (4.3.1-1) to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 1039657: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1039657 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: r-cran-pammtools Version: 0.5.8-1 Severity: serious Justification: autopkgtest failure Dear Maintainer, The autopkgtest of your package fails with r-base (4.3.1-1): 59s [ FAIL 2 | WARN 8 | SKIP 0 | PASS 341 ] 59s 59s ══ Failed tests ════════════════════════════════════════════════════════════════ 59s ── Error ('test-cumulative-effect.R:29'): LL helpers and as_ped produce equivalent LL windows ── 59s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols 59s Backtrace: 59s ▆ 59s 1. ├─pammtools::sim_pexp(...) at test-cumulative-effect.R:29:2 59s 2. │ ├─base::suppressMessages(ped <- ped %>% left_join(reduce(df2, full_join))) 59s 3. │ │ └─base::withCallingHandlers(...) 59s 4. │ └─ped %>% left_join(reduce(df2, full_join)) 59s 5. ├─dplyr::left_join(., reduce(df2, full_join)) 59s 6. ├─pammtools:::left_join.ped(., reduce(df2, full_join)) 59s 7. │ └─pammtools:::ped_classes(y) 59s 8. │ └─class(ped) %in% ... 59s 9. └─purrr::reduce(df2, full_join) 59s 10. └─purrr:::reduce_impl(.x, .f, ..., .init = .init, .dir = .dir) 59s 11. ├─dplyr (local) fn(out, elt, ...) 59s 12. └─dplyr:::full_join.data.frame(out, elt, ...) 59s 13. └─dplyr:::join_mutate(...) 59s 14. ├─base::`[<-`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,2]>`) 59s 15. └─tibble:::`[<-.tbl_df`(`*tmp*`, new_rows, names(y_key), value = `<tibble[,2]>`) 59s 16. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value)) 59s 17. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg) 59s 18. ├─base::withCallingHandlers(...) 59s 19. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]]) 59s ── Error ('test-simple-transform.R:50'): Transformation of regular survival data works ── 59s Error in `vectbl_assign(x[[j]], i, recycled_value[[j]])`: DLL requires the use of native symbols 59s Backtrace: 59s ▆ 59s 1. ├─base::`[<-`(`*tmp*`, 6, "days", value = `<dbl>`) at test-simple-transform.R:50:2 59s 2. └─tibble:::`[<-.tbl_df`(`*tmp*`, 6, "days", value = `<dbl>`) at test-simple-transform.R:50:2 59s 3. └─tibble:::tbl_subassign(x, i, j, value, i_arg, j_arg, substitute(value)) 59s 4. └─tibble:::tbl_subassign_row(xj, i, value, i_arg, value_arg) 59s 5. ├─base::withCallingHandlers(...) 59s 6. └─tibble:::vectbl_assign(x[[j]], i, recycled_value[[j]]) 59s 59s [ FAIL 2 | WARN 8 | SKIP 0 | PASS 341 ] https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-cran-pammtools/34918508/log.gz
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--- Begin Message ---Source: r-cran-pammtools Source-Version: 0.5.91-2 Done: Andreas Tille <[email protected]> We believe that the bug you reported is fixed in the latest version of r-cran-pammtools, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <[email protected]> (supplier of updated r-cran-pammtools package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Thu, 06 Jul 2023 15:00:42 +0200 Source: r-cran-pammtools Architecture: source Version: 0.5.91-2 Distribution: unstable Urgency: medium Maintainer: Debian R Packages Maintainers <[email protected]> Changed-By: Andreas Tille <[email protected]> Closes: 1039657 Changes: r-cran-pammtools (0.5.91-2) unstable; urgency=medium . * Rebuild with r-graphics-engine set by r-base Closes: #1039657 Checksums-Sha1: 2086dac2964d5bad7c9827753888069cebcca1a0 2360 r-cran-pammtools_0.5.91-2.dsc a92fbe8179cdc6d86e428e665ea428d6819c1943 3380 r-cran-pammtools_0.5.91-2.debian.tar.xz cba80a6f2db7bbd8bfcd8ee0e1c61e3760f1ca53 16000 r-cran-pammtools_0.5.91-2_amd64.buildinfo Checksums-Sha256: c324b65d253aa7c502db4b31aab9c36d3f039b586923355eff149902a409c586 2360 r-cran-pammtools_0.5.91-2.dsc 4ac4a379b45590f941628d1c0f50b8a7eae6a7d2f3f22a7b16f3bf7b5dbcca8c 3380 r-cran-pammtools_0.5.91-2.debian.tar.xz ae17ef93e30c2c58327f106bfa350b74b2421a1a109f185372673abf6ba9944f 16000 r-cran-pammtools_0.5.91-2_amd64.buildinfo Files: 82375aff2a850684d9b03463127c40f3 2360 gnu-r optional r-cran-pammtools_0.5.91-2.dsc 13e3b885d9d4277c968679db8eae5c50 3380 gnu-r optional r-cran-pammtools_0.5.91-2.debian.tar.xz b4f5f1b98c9c36a716930661353698dd 16000 gnu-r optional r-cran-pammtools_0.5.91-2_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmSmu48RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFVKQ//S15YGqkTQU7FCTKTiVEZ3iG3wQ6rb+uH vVfIVyOZzrrk2nct0yGCefAK6doljvIaUtTzBm0dFtesdtIMtXZVZqOOJsueXRoD NQy7xknIjBl6t53+11eTWhYFlSUQrSyAISyVYG36mDaUK8dlKEJaeDRmXhkQ+aR/ hQvL4M1iXGBoj442STOjhK959/BoukEinyekhX6o20ikCU/FGxVC8fXaPPokZwd1 3Aqf9pgoFtjuMTeRvxuV32NVYICto++KtwdcOY2pTUentXoHcRzDVbKNCld54Sx1 X9hpXnKE7hzftPMS6iIVCbTzJUCejnbbOio740/eCLdRoERWJvextEXX835e4IXB DigT9xhpi790oJzMuGcddK4MStugp0JluZkVIPxAGbpOlUYM+csLef1OrCSqFUsM sOidrdltkz1JvQcwQqon1Qfn35SYB9Gqan2ibo10EYwwRkv60B2UGf3FYIKYhEFK CtKONDq0LM5l4DU8+uIbOFuPmcPKKAU/urTOZfNjC9nXnh13iGtC+LXUrRs5isjl i5xjHmpsBjrHIiGecESI7d3VYIzS4oYl1DaRvHvCq1wbvNCmaaHY70BfmXV405tv bp/cqC73beazoDZPu/EB/wEPr8wXmAgYLoL6Q6Jcors2uuJpfAHDghPrDTh4AZeo jdX0xyvk0IA= =xGzs -----END PGP SIGNATURE-----
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