Your message dated Sat, 23 Dec 2023 08:35:55 +0000
with message-id <[email protected]>
and subject line Bug#1046157: fixed in snpomatic 1.0-7
has caused the Debian Bug report #1046157,
regarding snpomatic: Fails to build source after successful build
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1046157: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1046157
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: snpomatic
Version: 1.0-6
Severity: minor
Tags: trixie sid ftbfs
User: [email protected]
Usertags: ftbfs-sab-20230813 ftbfs-source-after-build
User: [email protected]
Usertags: qa-doublebuild
Hi,
This package fails to build a source package after a successful build
(dpkg-buildpackage ; dpkg-buildpackage -S).
This is probably a clear violation of Debian Policy section 4.9 (clean target),
but this is filed as severity:minor for now, because a discussion on
debian-devel showed that we might want to revisit the requirement of a working
'clean' target.
More information about this class of issues, included common problems and
solutions, is available at
https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild
Relevant part of the build log:
> cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env
> -us -uc -rfakeroot -S
> -----------------------------------------------------------------------------------------------------------------------
>
> dpkg-buildpackage: info: source package snpomatic
> dpkg-buildpackage: info: source version 1.0-6
> dpkg-buildpackage: info: source distribution unstable
> dpkg-buildpackage: info: source changed by Andreas Tille <[email protected]>
> dpkg-source --before-build .
> debian/rules clean
> dh clean
> rm -f debian/snpomatic.debhelper.log
> debian/rules override_dh_auto_clean
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> /usr/bin/make clean
> make[2]: Entering directory '/<<PKGBUILDDIR>>'
> rm -f *.o
> rm -f src/*.o
> rm -f findknownsnps
> rm -f variety
> make[2]: Leaving directory '/<<PKGBUILDDIR>>'
> rm -rf debian/findknownsnps.1
> rm -rf debian/findknownsnps.1.html
> rm -f mapcontigs reassemble ungap
> dh_auto_clean --
> make -j8 clean
> make[2]: Entering directory '/<<PKGBUILDDIR>>'
> rm -f *.o
> rm -f src/*.o
> rm -f findknownsnps
> rm -f variety
> make[2]: Leaving directory '/<<PKGBUILDDIR>>'
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> dh_clean
> rm -f debian/debhelper-build-stamp
> rm -rf debian/.debhelper/
> rm -f -- debian/snpomatic.substvars debian/files
> rm -fr -- debian/snpomatic/ debian/tmp/
> find . \( \( \
> \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path
> .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o
> -type f -a \
> \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
> -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
> -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
> -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
> \) -exec rm -f {} + \) -o \
> \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \)
> \)
> dpkg-source -b .
> dpkg-source: info: using source format '3.0 (quilt)'
> dpkg-source: info: building snpomatic using existing
> ./snpomatic_1.0.orig.tar.gz
> dpkg-source: info: using patch list from debian/patches/series
> dpkg-source: info: local changes detected, the modified files are:
> snpomatic-1.0/doc/Manual.txt
> dpkg-source: error: aborting due to unexpected upstream changes, see
> /tmp/snpomatic_1.0-6.diff.hflhHk
> dpkg-source: info: Hint: make sure the version in debian/changelog matches
> the unpacked source tree
> dpkg-source: info: you can integrate the local changes with dpkg-source
> --commit
> dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 2
>
> E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage
> --sanitize-env -us -uc -rfakeroot -S' failed to run.
The full build log is available from:
http://qa-logs.debian.net/2023/08/13/snpomatic_1.0-6_unstable.log
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: snpomatic
Source-Version: 1.0-7
Done: Sascha Steinbiss <[email protected]>
We believe that the bug you reported is fixed in the latest version of
snpomatic, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Sascha Steinbiss <[email protected]> (supplier of updated snpomatic package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 23 Dec 2023 09:19:24 +0100
Source: snpomatic
Architecture: source
Version: 1.0-7
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Sascha Steinbiss <[email protected]>
Closes: 1046157
Changes:
snpomatic (1.0-7) unstable; urgency=medium
.
* Enable building twice in a row by cleaning antiword output.
Closes: #1046157
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--- End Message ---
