Your message dated Mon, 17 Jun 2024 16:47:09 +0000
with message-id <[email protected]>
and subject line Bug#1053649: fixed in numpy 1:1.24.2-1+deb12u1
has caused the Debian Bug report #1053649,
regarding python3-numpy fails to install due to file clash with python-numpy
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1053649: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1053649
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: python3-numpy
Version: 1:1.24.2-1
Severity: important
I am upgrading a system (laptop) from bullseye to bookworm. Everything
was upgraded fully in bullseye, and all foreign (-dmo) packages
removed before starting the upgrade. There were some old packages
onthe system, include quite a few pthon-* (python2) packages.
I did
apt upgrade --without-new-pkgs
first (as recomended on
debian.org/releases/bookworm/amd64/release-notes/ch-upgrading.en.html) and that
went fine, but the subsequent
apt full-upgrade
failed with:
Preparing to unpack .../python3-numpy_1%3a1.24.2-1_amd64.deb ...
Unpacking python3-numpy (1:1.24.2-1) ...
dpkg: error processing archive
/var/cache/apt/archives/python3-numpy_1%3a1.24.2-1_amd64.deb
(--unpack):
trying to overwrite '/usr/bin/f2py', which is also in package python-numpy
1:1.16.2-1
dpkg-deb: error: paste subprocess was killed by signal (Broken pipe)
Errors were encountered while processing:
/var/cache/apt/archives/python3-numpy_1%3a1.24.2-1_amd64.deb
E: Sub-process /usr/bin/dpkg returned an error code (1)
trying to remove python-numpy didn't work either:
sudo dpkg -r python-numpy
dpkg: dependency problems prevent removal of python-numpy:
python-gtk2 depends on python-numpy (>= 1:1.13.1).
python-gtk2 depends on python-numpy-abi9; however:
Package python-numpy-abi9 is not installed.
Package python-numpy which provides python-numpy-abi9 is to be removed.
python-gtk2 depends on python-numpy (>= 1:1.13.1).
python-gtk2 depends on python-numpy-abi9; however:
Package python-numpy-abi9 is not installed.
Package python-numpy which provides python-numpy-abi9 is to be removed.
removing 2 packages together:
sudo dpkg -r python-numpy python-gtk2
[sudo] password for tess:
(Reading database ... 365279 files and directories currently installed.)
Removing python-gtk2 (2.24.0-5.1+b1) ...
Removing python-numpy (1:1.16.2-1) ...
worked, and then I was able to carry on with
apt --fix-broken-install
This was a totally normal upgrade (albeit with a few old packages lyng around)
, so should have worked.
I guess there should be a conflict added to prevent this, which would force the
old python-numpy to be removed before the new python3-numpy goes in?
Cheers.
-- System Information:
Debian Release: 12.2
Architecture: amd64 (x86_64)
Kernel: Linux 5.10.0-26-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8),
LANGUAGE=en_GB:en (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Versions of packages python3-numpy depends on:
ii libblas3 [libblas.so.3] 3.11.0-2
ii libc6 2.36-9+deb12u2
ii liblapack3 3.11.0-2
iU python3 3.11.2-1+b1
ii python3-pkg-resources 66.1.1-1
ii python3.9 3.9.2-1
--- End Message ---
--- Begin Message ---
Source: numpy
Source-Version: 1:1.24.2-1+deb12u1
Done: Timo Röhling <[email protected]>
We believe that the bug you reported is fixed in the latest version of
numpy, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Timo Röhling <[email protected]> (supplier of updated numpy package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sun, 05 May 2024 09:56:59 +0200
Source: numpy
Architecture: source
Version: 1:1.24.2-1+deb12u1
Distribution: bookworm
Urgency: medium
Maintainer: Sandro Tosi <[email protected]>
Changed-By: Timo Röhling <[email protected]>
Closes: 1053649
Changes:
numpy (1:1.24.2-1+deb12u1) bookworm; urgency=medium
.
* Declare conflict with python-numpy due to f2py (Closes: #1053649)
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