Your message dated Thu, 18 Jul 2024 13:24:34 +0200
with message-id
<trinity-b59d7fff-3b0f-407a-b1fb-ea0b773a85bf-1721301874374@3c-app-gmx-bs18>
and subject line pymol bug 602610: clean only provided in commercial version
has caused the Debian Bug report #602610,
regarding Package freemol.mengine for full modeling capabilities
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
602610: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=602610
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: pymol
Version: 1.2r2-1.1+b1
Severity: normal
Hello,
while running clean all within my pymol session (I run it as pymol
-x -W 1000 -H 900 -X 10 -Y 10), I get the following error:
PyMOL>clean all
Error: unable to import freemol.mengine module.
This PyMOL build appears not to include full modeling capabilities.
While I'm unsure what "clean all" should be doing, it seems that
there are some things missing in the build.
Cheers,
Vincent
-- System Information:
Debian Release: squeeze/sid
APT prefers unstable
APT policy: (500, 'unstable'), (500, 'testing'), (500, 'stable'), (1,
'experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 2.6.32-5-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_GB.utf8, LC_CTYPE=en_GB.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Versions of packages pymol depends on:
ii freeglut3 2.6.0-1 OpenGL Utility Toolkit
ii libc6 2.11.2-7 Embedded GNU C Library: Shared lib
ii libfreetype6 2.4.2-2 FreeType 2 font engine, shared lib
ii libgcc1 1:4.5.1-9 GCC support library
ii libgl1-mesa-glx [libgl1 7.7.1-4 A free implementation of the OpenG
ii libglu1-mesa [libglu1] 7.7.1-4 The OpenGL utility library (GLU)
ii libpng12-0 1.2.44-1 PNG library - runtime
ii libstdc++6 4.5.1-9 The GNU Standard C++ Library v3
ii python 2.6.6-3+squeeze1 interactive high-level object-orie
ii python-pmw 1.3.2-5 Pmw -- Python MegaWidgets
ii python-support 1.0.11 automated rebuilding support for P
ii python-tk 2.6.6-1 Tkinter - Writing Tk applications
ii zlib1g 1:1.2.3.4.dfsg-3 compression library - runtime
Versions of packages pymol recommends:
ii apbs 1.2.1b-1 Adaptive Poisson Boltzmann Solver
pymol suggests no packages.
-- no debconf information
--- End Message ---
--- Begin Message ---
tags 602610 wontfix
Hello, I just tried this in the recent release of version 3.0 of Pymol and it
now clearly states:
PyMOL>clean all
Incentive-Only-Error: "clean" is not available in Open-Source PyMOL
Please visit http://pymol.org if you are interested in the
full featured "Incentive PyMOL" version.
--- End Message ---
