Your message dated Fri, 20 Dec 2024 21:50:49 +0000
with message-id <[email protected]>
and subject line Bug#1043846: fixed in biomaj3-process 3.0.19-3
has caused the Debian Bug report #1043846,
regarding biomaj3-download: Fails to build source after successful build
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1043846: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1043846
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: biomaj3-download
Version: 3.2.9-1
Severity: minor
Tags: trixie sid ftbfs
User: [email protected]
Usertags: ftbfs-sab-20230813 ftbfs-source-after-build
User: [email protected]
Usertags: qa-doublebuild
Hi,
This package fails to build a source package after a successful build
(dpkg-buildpackage ; dpkg-buildpackage -S).
This is probably a clear violation of Debian Policy section 4.9 (clean target),
but this is filed as severity:minor for now, because a discussion on
debian-devel showed that we might want to revisit the requirement of a working
'clean' target.
More information about this class of issues, included common problems and
solutions, is available at
https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild
Relevant part of the build log:
> cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env
> -us -uc -rfakeroot -S
> ---------------------------------------------------------------------------------------------------------------------------------------
>
> dpkg-buildpackage: info: source package biomaj3-download
> dpkg-buildpackage: info: source version 3.2.9-1
> dpkg-buildpackage: info: source distribution unstable
> dpkg-buildpackage: info: source changed by Olivier Sallou <[email protected]>
> dpkg-source --before-build .
> debian/rules clean
> dh clean --with python3 --buildsystem=pybuild
> dh_auto_clean -O--buildsystem=pybuild
> I: pybuild base:275: python3.11 setup.py clean
> running clean
> removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biomaj-download/build' (and
> everything under it)
> 'build/bdist.linux-x86_64' does not exist -- can't clean it
> 'build/scripts-3.11' does not exist -- can't clean it
> dh_autoreconf_clean -O--buildsystem=pybuild
> dh_clean -O--buildsystem=pybuild
> dpkg-source -b .
> dpkg-source: info: using source format '3.0 (quilt)'
> dpkg-source: info: building biomaj3-download using existing
> ./biomaj3-download_3.2.9.orig.tar.xz
> dpkg-source: warning: file
> biomaj3-download-3.2.9/biomaj_download.egg-info/SOURCES.txt has no final
> newline (either original or modified version)
> dpkg-source: info: local changes detected, the modified files are:
> biomaj3-download-3.2.9/biomaj_download.egg-info/PKG-INFO
> biomaj3-download-3.2.9/biomaj_download.egg-info/SOURCES.txt
> biomaj3-download-3.2.9/biomaj_download.egg-info/dependency_links.txt
> biomaj3-download-3.2.9/biomaj_download.egg-info/requires.txt
> biomaj3-download-3.2.9/biomaj_download.egg-info/top_level.txt
> biomaj3-download-3.2.9/biomaj_download/message/downmessage_pb2.py
> dpkg-source: error: aborting due to unexpected upstream changes, see
> /tmp/biomaj3-download_3.2.9-1.diff.3hrXqu
> dpkg-source: info: Hint: make sure the version in debian/changelog matches
> the unpacked source tree
> dpkg-source: info: you can integrate the local changes with dpkg-source
> --commit
> dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 2
>
> E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage
> --sanitize-env -us -uc -rfakeroot -S' failed to run.
The full build log is available from:
http://qa-logs.debian.net/2023/08/13/biomaj3-download_3.2.9-1_unstable.log
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: biomaj3-process
Source-Version: 3.0.19-3
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
biomaj3-process, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated biomaj3-process package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 20 Dec 2024 21:35:17 +0100
Source: biomaj3-process
Architecture: source
Version: 3.0.19-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1043846
Changes:
biomaj3-process (3.0.19-3) unstable; urgency=medium
.
* Team upload.
* Fix clean target
Closes: #1043846
* Standards-Version: 4.7.0 (routine-update)
* Remove trailing whitespace in debian/changelog (routine-update)
* d/control: drop Python-Egg-Name
Checksums-Sha1:
abfa0a17a735eec421ea2a971abe5a360c0be3d3 2378 biomaj3-process_3.0.19-3.dsc
1b36d1356cbfe2259fa78e0d88b7b2757096f886 14000
biomaj3-process_3.0.19-3.debian.tar.xz
127a706c7cf65bb3c503e1d96a999603d0f1262e 8762
biomaj3-process_3.0.19-3_amd64.buildinfo
Checksums-Sha256:
dff6add2a8c42f599f008cd330d6a28000034648d70f2d890bc7fea20fdd3c35 2378
biomaj3-process_3.0.19-3.dsc
1eb1e1cd65142ebcb8a41a8f2d9846c113919353702bb52af423e9daab08b78b 14000
biomaj3-process_3.0.19-3.debian.tar.xz
ffece4fda50ee9ce903bc6b26151a2f170134bcb6736cb21d6947a0d10e521af 8762
biomaj3-process_3.0.19-3_amd64.buildinfo
Files:
1faf2da751815e58b8b6b33ce7b3f4c0 2378 python optional
biomaj3-process_3.0.19-3.dsc
5e017311b294d7ea16e66efe3b9f809f 14000 python optional
biomaj3-process_3.0.19-3.debian.tar.xz
1a436bdfe1688ad727120b698bc38e94 8762 python optional
biomaj3-process_3.0.19-3_amd64.buildinfo
-----BEGIN PGP SIGNATURE-----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=Z1Fe
-----END PGP SIGNATURE-----
pgpUq5qaqbrkn.pgp
Description: PGP signature
--- End Message ---
