Your message dated Thu, 25 Sep 2025 10:06:52 +0000
with message-id <[email protected]>
and subject line Bug#1069098: fixed in emboss 6.6.0+dfsg-18
has caused the Debian Bug report #1069098,
regarding emboss: all executables segfault on s390x
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)


-- 
1069098: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1069098
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: emboss
Version: 6.6.0+dfsg-9
Severity: important
Tags: bullseye bookworm trixie sid
X-Debbugs-CC: [email protected]

Hello,

All emboss executables segfault on s390x since bullseye. Segfault is evident when calling any of emboss executables without CLI arguments or only with '--help'. Checking with GDB on sid for 'gdb seqret' says:

(gdb) run
Starting program: /usr/bin/seqret
[Thread debugging using libthread_db enabled]
Using host libthread_db library "/lib/s390x-linux-gnu/libthread_db.so.1".

Program received signal SIGSEGV, Segmentation fault.
cvt_s (code=<optimized out>, ap=0x3ffffff99c0, put=0x3fff77b79b8 <fmtAppend>, cl=0x3ffffff9e70, flags=0x3ffffff99c8, width=-2147483648, precision=-2147483648) at ajfmt.c:352
352        if(str)

GDB localises the issue for seqret in a string formatting function.

Andrius

--- End Message ---
--- Begin Message ---
Source: emboss
Source-Version: 6.6.0+dfsg-18
Done: Andrius Merkys <[email protected]>

We believe that the bug you reported is fixed in the latest version of
emboss, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andrius Merkys <[email protected]> (supplier of updated emboss package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Thu, 25 Sep 2025 05:31:45 -0400
Source: emboss
Architecture: source
Version: 6.6.0+dfsg-18
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<[email protected]>
Changed-By: Andrius Merkys <[email protected]>
Closes: 1069098
Changes:
 emboss (6.6.0+dfsg-18) unstable; urgency=medium
 .
   * Team upload.
 .
   [ Alexandre Detiste ]
   * xz is the default compression
 .
   [ Andrius Merkys ]
   * Fix segfault on s390x (Closes: #1069098). Thanks Pranav P!
Checksums-Sha1:
 593fffc7d8ba27cad5c538fe7e819b708432486a 2564 emboss_6.6.0+dfsg-18.dsc
 3739e1b4926707a610d2486968c96aee401e87f5 251188 
emboss_6.6.0+dfsg-18.debian.tar.xz
 a837ecaefc36a34ba1ad9f8b136197c07a717a0a 12688 
emboss_6.6.0+dfsg-18_source.buildinfo
Checksums-Sha256:
 7c445a242ea7959d7b9c47e0ab682578cf7f7bc25c5e6451328c03095b17e2e1 2564 
emboss_6.6.0+dfsg-18.dsc
 6c0dfff8f2cf8c56ff28641bfbbfd44976be86c1637907fbec7cf779a18a311e 251188 
emboss_6.6.0+dfsg-18.debian.tar.xz
 1189385dbc3cf3022cb6940d1411e5f3ff90f75d2baa6713bedcb2684c2fe136 12688 
emboss_6.6.0+dfsg-18_source.buildinfo
Files:
 9c4c487fc8196ed4035d16321c18cb58 2564 science optional emboss_6.6.0+dfsg-18.dsc
 120234005c56d4f800ab8e236d94b3da 251188 science optional 
emboss_6.6.0+dfsg-18.debian.tar.xz
 38d0e7a805e7c46e14104959ac94b2fe 12688 science optional 
emboss_6.6.0+dfsg-18_source.buildinfo

-----BEGIN PGP SIGNATURE-----
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=sxnS
-----END PGP SIGNATURE-----

Attachment: pgpuEONJys782.pgp
Description: PGP signature


--- End Message ---

Reply via email to