Your message dated Mon, 13 Oct 2025 12:49:15 +0000
with message-id <[email protected]>
and subject line Bug#1116728: fixed in dials 3.25.0+dfsg3-3
has caused the Debian Bug report #1116728,
regarding dials: FTBFS with the nocheck build profile
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
1116728: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1116728
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:dials
Version: 3.25.0+dfsg3-2
Severity: important
Tags: forky sid ftbfs
User: [email protected]
Usertags: ftbfs-nocheck-profile
Dear maintainer:
During a rebuild of all packages in unstable using the nocheck build profile,
your package failed to build.
Below you will find how the build ends (probably the most relevant part,
but not necessarily). If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202509/
A wiki page discussing how to reproduce bugs in this category and
possible solutions is available here:
https://wiki.debian.org/qa.debian.org/FTBFS/Nocheck
(It's a wiki, so you are welcome to contribute)
[ Note: This is RC, but I will wait at least two weeks before raising
the severities, there are a lot of gcc-15 and CMake 4 bugs open now ].
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:dials, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
pybuild --clean -i python{version} -p 3.13
I: pybuild base:311: python3.13 setup.py clean
/usr/lib/python3/dist-packages/setuptools/dist.py:759:
SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX
license expression:
License :: OSI Approved :: BSD License
See
https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license
for details.
********************************************************************************
!!
self._finalize_license_expression()
Found 92 dials dispatchers
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_dials/build' (and everything
under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/dials.substvars debian/python3-dials.substvars
debian/files
rm -fr -- debian/dials/ debian/tmp/ debian/python3-dials/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path
.\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o
-type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a \( -name autom4te.cache -o -name __pycache__ \)
-prune -exec rm -rf {} + \) \)
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
pybuild --configure -i python{version} -p 3.13
I: pybuild base:311: python3.13 setup.py config
/usr/lib/python3/dist-packages/setuptools/dist.py:759:
SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX
license expression:
License :: OSI Approved :: BSD License
See
https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license
for details.
********************************************************************************
!!
self._finalize_license_expression()
Found 92 dials dispatchers
running config
I: pybuild pybuild:334: cmake -DPython_EXECUTABLE=/usr/bin/python3.13 -S . -B
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_dials/build/lib
-- The C compiler identification is GNU 15.2.0
-- The CXX compiler identification is GNU 15.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Python: /usr/bin/python3.13 (found version "3.13.7") found components:
Interpreter Development Development.Module Development.Embed
Error: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_dials/build/lib/libtbx_env is
not a file
CMake Error at cmake/Modules/FindCCTBX.cmake:109 (message):
Failed to read environment file:
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_dials/build/lib//libtbx_env
Call Stack (most recent call first):
cmake/Modules/FindCCTBX.cmake:116 (_read_libtbx_env)
cmake/Modules/FindCCTBX.cmake:263 (_cctbx_read_module)
CMakeLists.txt:18 (find_package)
-- Configuring incomplete, errors occurred!
E: pybuild pybuild:389: configure: plugin distutils failed with: exit code=1:
cmake -DPython_EXECUTABLE=/usr/bin/python3.13 -S . -B
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_dials/build/lib
dh_auto_configure: error: pybuild --configure -i python{version} -p 3.13
returned exit code 13
make: *** [debian/rules:22: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
--- End Message ---
--- Begin Message ---
Source: dials
Source-Version: 3.25.0+dfsg3-3
Done: Santiago Vila <[email protected]>
We believe that the bug you reported is fixed in the latest version of
dials, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Santiago Vila <[email protected]> (supplier of updated dials package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 13 Oct 2025 14:25:00 +0200
Source: dials
Architecture: source
Version: 3.25.0+dfsg3-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Santiago Vila <[email protected]>
Closes: 1112841 1116728
Changes:
dials (3.25.0+dfsg3-3) unstable; urgency=medium
.
* Team upload.
* Fix build with CMake 4. Closes: #1112841.
* d/control: Drop <!nocheck> from python3-cctbx. Closes: #1116728.
* d/control: Drop "Rules-Requires-Root: no" (default).
* d/control: Update standards-version.
* d/salsa-ci.yml: Use the standard simplified version.
* d/salsa-ci.yml: Disable building on i386.
* d/salsa-ci.yml: Allow blhc to fail.
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