Your message dated Tue, 30 Sep 2025 19:05:50 +0000
with message-id <[email protected]>
and subject line Bug#1116885: fixed in python-trx-python 0.3-2
has caused the Debian Bug report #1116885,
regarding python-trx-python: FTBFS with the nocheck build profile
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1116885: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1116885
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:python-trx-python
Version: 0.3-1
Severity: important
Tags: forky sid ftbfs
User: [email protected]
Usertags: ftbfs-nocheck-profile
Dear maintainer:
During a rebuild of all packages in unstable using the nocheck build profile,
your package failed to build.
Below you will find how the build ends (probably the most relevant part,
but not necessarily). If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202509/
A wiki page discussing how to reproduce bugs in this category and
possible solutions is available here:
https://wiki.debian.org/qa.debian.org/FTBFS/Nocheck
(It's a wiki, so you are welcome to contribute)
[ Note: This is RC, but I will wait at least two weeks before raising
the severities, there are a lot of gcc-15 and CMake 4 bugs open now ].
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:python-trx-python, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build"
module
I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation
--wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13
* Building wheel...
/usr/lib/python3/dist-packages/setuptools/dist.py:759:
SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX
license expression:
License :: OSI Approved :: BSD License
See
https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license
for details.
********************************************************************************
!!
self._finalize_license_expression()
running bdist_wheel
running build
running build_py
creating build/lib/trx
copying trx/__init__.py -> build/lib/trx
copying trx/version.py -> build/lib/trx
copying trx/workflows.py -> build/lib/trx
copying trx/fetcher.py -> build/lib/trx
copying trx/io.py -> build/lib/trx
copying trx/trx_file_memmap.py -> build/lib/trx
copying trx/viz.py -> build/lib/trx
copying trx/streamlines_ops.py -> build/lib/trx
copying trx/utils.py -> build/lib/trx
creating build/lib/trx/tests
copying trx/tests/test_memmap.py -> build/lib/trx/tests
copying trx/tests/test_io.py -> build/lib/trx/tests
copying trx/tests/test_streamlines_ops.py -> build/lib/trx/tests
running build_scripts
creating build/scripts-3.13
copying and adjusting scripts/tff_generate_trx_from_scratch.py ->
build/scripts-3.13
copying and adjusting scripts/tff_verify_header_compatibility.py ->
build/scripts-3.13
copying and adjusting scripts/tff_convert_dsi_studio.py -> build/scripts-3.13
copying and adjusting scripts/tff_concatenate_tractograms.py ->
build/scripts-3.13
copying and adjusting scripts/tff_simple_compare.py -> build/scripts-3.13
copying and adjusting scripts/tff_convert_tractogram.py -> build/scripts-3.13
copying and adjusting scripts/tff_visualize_overlap.py -> build/scripts-3.13
copying and adjusting scripts/tff_manipulate_datatype.py -> build/scripts-3.13
copying and adjusting scripts/tff_validate_trx.py -> build/scripts-3.13
changing mode of build/scripts-3.13/tff_generate_trx_from_scratch.py from 644
to 755
changing mode of build/scripts-3.13/tff_verify_header_compatibility.py from 644
to 755
changing mode of build/scripts-3.13/tff_convert_dsi_studio.py from 644 to 755
changing mode of build/scripts-3.13/tff_concatenate_tractograms.py from 644 to
755
changing mode of build/scripts-3.13/tff_simple_compare.py from 644 to 755
changing mode of build/scripts-3.13/tff_convert_tractogram.py from 644 to 755
changing mode of build/scripts-3.13/tff_visualize_overlap.py from 644 to 755
changing mode of build/scripts-3.13/tff_manipulate_datatype.py from 644 to 755
changing mode of build/scripts-3.13/tff_validate_trx.py from 644 to 755
installing to build/bdist.linux-x86_64/wheel
running install
running install_lib
creating build/bdist.linux-x86_64/wheel
creating build/bdist.linux-x86_64/wheel/trx
copying build/lib/trx/__init__.py -> build/bdist.linux-x86_64/wheel/./trx
creating build/bdist.linux-x86_64/wheel/trx/tests
copying build/lib/trx/tests/test_memmap.py ->
build/bdist.linux-x86_64/wheel/./trx/tests
copying build/lib/trx/tests/test_io.py ->
build/bdist.linux-x86_64/wheel/./trx/tests
copying build/lib/trx/tests/test_streamlines_ops.py ->
build/bdist.linux-x86_64/wheel/./trx/tests
copying build/lib/trx/version.py -> build/bdist.linux-x86_64/wheel/./trx
copying build/lib/trx/workflows.py -> build/bdist.linux-x86_64/wheel/./trx
copying build/lib/trx/fetcher.py -> build/bdist.linux-x86_64/wheel/./trx
copying build/lib/trx/io.py -> build/bdist.linux-x86_64/wheel/./trx
copying build/lib/trx/trx_file_memmap.py -> build/bdist.linux-x86_64/wheel/./trx
copying build/lib/trx/viz.py -> build/bdist.linux-x86_64/wheel/./trx
copying build/lib/trx/streamlines_ops.py -> build/bdist.linux-x86_64/wheel/./trx
copying build/lib/trx/utils.py -> build/bdist.linux-x86_64/wheel/./trx
running install_egg_info
running egg_info
creating trx_python.egg-info
writing trx_python.egg-info/PKG-INFO
writing dependency_links to trx_python.egg-info/dependency_links.txt
writing requirements to trx_python.egg-info/requires.txt
writing top-level names to trx_python.egg-info/top_level.txt
writing manifest file 'trx_python.egg-info/SOURCES.txt'
reading manifest file 'trx_python.egg-info/SOURCES.txt'
adding license file 'LICENSE'
writing manifest file 'trx_python.egg-info/SOURCES.txt'
Copying trx_python.egg-info to
build/bdist.linux-x86_64/wheel/./trx_python-0.3.egg-info
running install_scripts
creating build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts
copying build/scripts-3.13/tff_generate_trx_from_scratch.py ->
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts
copying build/scripts-3.13/tff_verify_header_compatibility.py ->
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts
copying build/scripts-3.13/tff_convert_dsi_studio.py ->
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts
copying build/scripts-3.13/tff_concatenate_tractograms.py ->
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts
copying build/scripts-3.13/tff_simple_compare.py ->
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts
copying build/scripts-3.13/tff_convert_tractogram.py ->
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts
copying build/scripts-3.13/tff_visualize_overlap.py ->
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts
copying build/scripts-3.13/tff_manipulate_datatype.py ->
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts
copying build/scripts-3.13/tff_validate_trx.py ->
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts
changing mode of
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts/tff_generate_trx_from_scratch.py
to 755
changing mode of
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts/tff_verify_header_compatibility.py
to 755
changing mode of
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts/tff_convert_dsi_studio.py
to 755
changing mode of
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts/tff_concatenate_tractograms.py
to 755
changing mode of
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts/tff_simple_compare.py
to 755
changing mode of
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts/tff_convert_tractogram.py
to 755
changing mode of
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts/tff_visualize_overlap.py
to 755
changing mode of
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts/tff_manipulate_datatype.py
to 755
changing mode of
build/bdist.linux-x86_64/wheel/trx_python-0.3.data/scripts/tff_validate_trx.py
to 755
creating build/bdist.linux-x86_64/wheel/trx_python-0.3.dist-info/WHEEL
creating
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/.tmp-n9hk23qe/trx_python-0.3-py3-none-any.whl'
and adding 'build/bdist.linux-x86_64/wheel' to it
adding 'trx/__init__.py'
adding 'trx/fetcher.py'
adding 'trx/io.py'
adding 'trx/streamlines_ops.py'
adding 'trx/trx_file_memmap.py'
adding 'trx/utils.py'
adding 'trx/version.py'
adding 'trx/viz.py'
adding 'trx/workflows.py'
adding 'trx/tests/test_io.py'
adding 'trx/tests/test_memmap.py'
adding 'trx/tests/test_streamlines_ops.py'
adding 'trx_python-0.3.data/scripts/tff_concatenate_tractograms.py'
adding 'trx_python-0.3.data/scripts/tff_convert_dsi_studio.py'
adding 'trx_python-0.3.data/scripts/tff_convert_tractogram.py'
adding 'trx_python-0.3.data/scripts/tff_generate_trx_from_scratch.py'
adding 'trx_python-0.3.data/scripts/tff_manipulate_datatype.py'
adding 'trx_python-0.3.data/scripts/tff_simple_compare.py'
adding 'trx_python-0.3.data/scripts/tff_validate_trx.py'
adding 'trx_python-0.3.data/scripts/tff_verify_header_compatibility.py'
adding 'trx_python-0.3.data/scripts/tff_visualize_overlap.py'
adding 'trx_python-0.3.dist-info/licenses/LICENSE'
adding 'trx_python-0.3.dist-info/METADATA'
adding 'trx_python-0.3.dist-info/WHEEL'
adding 'trx_python-0.3.dist-info/top_level.txt'
adding 'trx_python-0.3.dist-info/RECORD'
removing build/bdist.linux-x86_64/wheel
Successfully built trx_python-0.3-py3-none-any.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with
"installer" module
dh: command-omitted: The call to "dh_auto_test -O--buildsystem=pybuild" was
omitted due to "DEB_BUILD_OPTIONS=nocheck"
create-stamp debian/debhelper-build-stamp
dh_testroot -O--buildsystem=pybuild
dh_prep -O--buildsystem=pybuild
dh_auto_install --destdir=debian/python3-trx-python/ -O--buildsystem=pybuild
I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir
dh_installdocs -O--buildsystem=pybuild
dh_installchangelogs -O--buildsystem=pybuild
debian/rules override_dh_installman
make[1]: Entering directory '/<<PKGBUILDDIR>>'
help2man
/<<PKGBUILDDIR>>/debian/python3-trx-python/usr/bin/tff_concatenate_tractograms.py
\
--name="concatenate multiple tractograms into one" \
--version-string="0.3" \
--no-info \
> debian/tff_concatenate_tractograms.py.1
help2man: can't get `--help' info from
/<<PKGBUILDDIR>>/debian/python3-trx-python/usr/bin/tff_concatenate_tractograms.py
Try `--no-discard-stderr' if option outputs to stderr
make[1]: *** [debian/rules:11: override_dh_installman] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:6: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
--- End Message ---
--- Begin Message ---
Source: python-trx-python
Source-Version: 0.3-2
Done: Étienne Mollier <[email protected]>
We believe that the bug you reported is fixed in the latest version of
python-trx-python, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Étienne Mollier <[email protected]> (supplier of updated python-trx-python
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 30 Sep 2025 20:36:35 +0200
Source: python-trx-python
Architecture: source
Version: 0.3-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Étienne Mollier <[email protected]>
Closes: 1116885
Changes:
python-trx-python (0.3-2) unstable; urgency=medium
.
* d/control: python3-nibabel is needed for manual pages. (Closes: #1116885)
* d/control: declare compliance to standards version 4.7.2.
* d/control: drop redundant Rules-Requires-Root: no.
* d/watch: bump to v5 Github template.
Checksums-Sha1:
6e8af92a7aa85d69ec5f7feb582028159207a092 2474 python-trx-python_0.3-2.dsc
7fc859bedb76135cd42f44b4e8f357317ae75ba5 4536
python-trx-python_0.3-2.debian.tar.xz
Checksums-Sha256:
ee15133aa431c1a41f0964441637d74096abfa2d0a4498d30db9d74eca0b10ba 2474
python-trx-python_0.3-2.dsc
648b5132247ccaf8ff9ee83c12946cd42f42f807c3c9885d5292342a68dbe957 4536
python-trx-python_0.3-2.debian.tar.xz
Files:
fab6b872cc7604ef8d210fabb5a0fc83 2474 python optional
python-trx-python_0.3-2.dsc
8fcccd081e30f220b325a283b1152e6a 4536 python optional
python-trx-python_0.3-2.debian.tar.xz
-----BEGIN PGP SIGNATURE-----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=+s+y
-----END PGP SIGNATURE-----
pgpl3D07MeT68.pgp
Description: PGP signature
--- End Message ---
