Your message dated Wed, 12 Nov 2025 16:36:06 +0000
with message-id <[email protected]>
and subject line Bug#1103327: fixed in salmon 1.10.3+ds1-1
has caused the Debian Bug report #1103327,
regarding salmon: FTBFS with the nocheck build profile
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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immediately.)
--
1103327: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1103327
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:salmon
Version: 1.10.2+ds1-1
Severity: important
Tags: trixie sid ftbfs
User: [email protected]
Usertags: ftbfs-nocheck-profile
Dear maintainer:
During a rebuild of all packages in unstable using the nocheck build profile,
your package failed to build:
--------------------------------------------------------------------------------
[...]
removed
'/<<PKGBUILDDIR>>/debian/salmon/usr/lib/twopaco/twopaco-targets-release.cmake'
removed '/<<PKGBUILDDIR>>/debian/salmon/usr/lib/twopaco/twopaco-targets.cmake'
removed directory '/<<PKGBUILDDIR>>/debian/salmon/usr/lib/twopaco'
removed directory '/<<PKGBUILDDIR>>/debian/salmon/usr/lib'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_install
dh_install: warning: Cannot find (any matches for)
"obj-*/Testing/Temporary/*l*" (tried in ., debian/tmp)
dh_install: warning: salmon missing files: obj-*/Testing/Temporary/*l*
dh_install: error: missing files, aborting
make: *** [debian/rules:26: binary] Error 255
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202504/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:salmon, so that this is still
visible in the BTS web page for this package.
Notes:
* When a package is built with the nocheck profile, it means:
- DEB_BUILD_OPTIONS=nocheck
(the tests should be skipped during the build)
- DEB_BUILD_PROFILES=nocheck
(Build-Depends marked <!nocheck> are not installed)
- The contents of the package is allowed to be different than normal
* This category of bugs was going to be RC for trixie, but
according to the Release Managers it's a little bit late in the
release cycle to introduce a bunch of RC bugs of this type.
* In addition to the above, this package also fails when
using DEB_BUILD_OPTIONS=nocheck alone. In this mode:
- DEB_BUILD_OPTIONS=nocheck
(the tests should be skipped during the build)
- Build-Depends marked <!nocheck> are installed as normal
- The contents of the package should not change compared
to a regular build
Thanks.
--- End Message ---
--- Begin Message ---
Source: salmon
Source-Version: 1.10.3+ds1-1
Done: Yavor Doganov <[email protected]>
We believe that the bug you reported is fixed in the latest version of
salmon, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Yavor Doganov <[email protected]> (supplier of updated salmon package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 12 Nov 2025 06:25:26 +0200
Source: salmon
Architecture: source
Version: 1.10.3+ds1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Yavor Doganov <[email protected]>
Closes: 1088027 1097838 1103327
Changes:
salmon (1.10.3+ds1-1) unstable; urgency=medium
.
* Team upload.
.
[ Santiago Vila ]
* Fix FTBFS when using the nocheck build profile. Closes: #1103327.
.
[ Yavor Doganov ]
* New upstream release.
* debian/control (Build-Depends): Add libparallel-hashmap-dev and stop
using the bundled copy (Closes: #1088027). Remove libspdlog-dev to
avoid confusion; the package uses bundled ancient versions of spdlog
and fmtlib so it needs porting. Replace pkg-config with pkgconf.
(Rules-Requires-Root): Remove; redundant.
(Standards-Version): Claim compliance with 4.7.2; no changes needed.
* debian/rules: Enable all hardening.
* debian/external/pufferfish/include/libdivide/libdivide.h: Fix FTBFS
with GCC 15 (Closes: #1097838).
* debian/external/pufferfish/CMakeLists.txt: Remove useless CMake
message which confuses blhc.
* debian/patches/blhc.patch: Likewise.
* debian/watch: Switch to version 5.
* debian/copyright (Files-Excluded): Add include/parallel_hashmap.
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