Your message dated Sun, 10 May 2026 09:07:55 +0000
with message-id <[email protected]>
and subject line Bug#1135512: fixed in tombo 1.5.1-9
has caused the Debian Bug report #1135512,
regarding tombo: FTBFS: ImportError: cannot import name '_' from
'sphinx.ext.autodoc'
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1135512: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1135512
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:tombo
Version: 1.5.1-8
Severity: serious
Tags: ftbfs forky sid
Dear maintainer:
During a rebuild of all packages in unstable, this package failed to build.
Below you will find the last part of the build log (probably the most
relevant part, but not necessarily). If required, the full build log
is available here:
https://people.debian.org/~sanvila/build-logs/202605/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you cannot reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:tombo, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --with python3,sphinxdoc --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:385: python3.14 setup.py clean
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning:
Unknown distribution option: 'test_suite'
warnings.warn(msg)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning:
Unknown distribution option: 'tests_require'
warnings.warn(msg)
/usr/lib/python3/dist-packages/setuptools/dist.py:759:
SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX
license expression:
License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)
[... snipped ...]
You can read more about "package discovery" on setuptools documentation
page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'tombo.tombo_models' to be distributed and are
already explicitly excluding 'tombo.tombo_models' via
`find_namespace_packages(...)/find_namespace` or
`find_packages(...)/find`,
you can try to use `exclude_package_data`, or
`include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools
documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
copying tombo/_c_dynamic_programming.pyx ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo
copying tombo/_c_helper.pyx ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/debugDP.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/debugFit.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/debugRawDP.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotGroupComp.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotKmerDist.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotModelComp.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotMotifStats.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotMultiReadCorr.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotPerReadStats.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotROC.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotROCPerRead.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotReadCorr.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotSigMDS.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotSingleRead.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
copying tombo/R_scripts/plotSingleRun.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/R_scripts
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.5mC.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.6mA.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.CpG.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.dam.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.dcm.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/tombo_models
copying tombo/tombo_models/tombo.RNA.180mV.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/tombo_models
copying tombo/tombo_models/tombo.RNA.200mV.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/tombo_models
copying tombo/tombo_models/tombo.RNA.5mC.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/tombo_models
running build_ext
Compiling tombo/_c_dynamic_programming.pyx because it changed.
[1/1] Cythonizing tombo/_c_dynamic_programming.pyx
building 'tombo._c_dynamic_programming' extension
creating build/temp.linux-x86_64-cpython-314/tombo
x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
-I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include
-I/usr/include/python3.14 -c tombo/_c_dynamic_programming.cpp -o
build/temp.linux-x86_64-cpython-314/tombo/_c_dynamic_programming.o
x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared
-Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro
-Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection
-Wdate-time -D_FORTIFY_SOURCE=2
build/temp.linux-x86_64-cpython-314/tombo/_c_dynamic_programming.o
-L/usr/lib/x86_64-linux-gnu -o
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/_c_dynamic_programming.cpython-314-x86_64-linux-gnu.so
Compiling tombo/_c_helper.pyx because it changed.
[1/1] Cythonizing tombo/_c_helper.pyx
building 'tombo._c_helper' extension
x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
-I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include
-I/usr/include/python3.14 -c tombo/_c_helper.cpp -o
build/temp.linux-x86_64-cpython-314/tombo/_c_helper.o
x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared
-Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro
-Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection
-Wdate-time -D_FORTIFY_SOURCE=2
build/temp.linux-x86_64-cpython-314/tombo/_c_helper.o
-L/usr/lib/x86_64-linux-gnu -o
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build/tombo/_c_helper.cpython-314-x86_64-linux-gnu.so
I: pybuild base:385: /usr/bin/python3 setup.py build
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning:
Unknown distribution option: 'test_suite'
warnings.warn(msg)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning:
Unknown distribution option: 'tests_require'
warnings.warn(msg)
/usr/lib/python3/dist-packages/setuptools/dist.py:759:
SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX
license expression:
License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)
See
https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license
for details.
********************************************************************************
!!
self._finalize_license_expression()
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/resquiggle.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/_option_parsers.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/tombo_stats.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/tombo_helper.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/_version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/_filter_reads.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/_preprocess.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/_text_output_commands.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/_event_resquiggle.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/_default_parameters.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/_plot_commands.py ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
running egg_info
writing ont_tombo.egg-info/PKG-INFO
writing dependency_links to ont_tombo.egg-info/dependency_links.txt
writing entry points to ont_tombo.egg-info/entry_points.txt
writing requirements to ont_tombo.egg-info/requires.txt
writing top-level names to ont_tombo.egg-info/top_level.txt
reading manifest file 'ont_tombo.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '*' under directory 'cython'
adding license file 'LICENSE.md'
writing manifest file 'ont_tombo.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning:
Package 'tombo.R_scripts' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'tombo.R_scripts' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to
distribute this
package, please make sure that 'tombo.R_scripts' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation
page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'tombo.R_scripts' to be distributed and are
already explicitly excluding 'tombo.R_scripts' via
`find_namespace_packages(...)/find_namespace` or
`find_packages(...)/find`,
you can try to use `exclude_package_data`, or
`include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools
documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning:
Package 'tombo.tombo_models' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'tombo.tombo_models' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to
distribute this
package, please make sure that 'tombo.tombo_models' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation
page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'tombo.tombo_models' to be distributed and are
already explicitly excluding 'tombo.tombo_models' via
`find_namespace_packages(...)/find_namespace` or
`find_packages(...)/find`,
you can try to use `exclude_package_data`, or
`include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools
documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
copying tombo/_c_dynamic_programming.pyx ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
copying tombo/_c_helper.pyx ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/debugDP.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/debugFit.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/debugRawDP.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotGroupComp.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotKmerDist.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotModelComp.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotMotifStats.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotMultiReadCorr.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotPerReadStats.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotROC.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotROCPerRead.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotReadCorr.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotSigMDS.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotSingleRead.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
copying tombo/R_scripts/plotSingleRun.R ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/R_scripts
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.5mC.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.6mA.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.CpG.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.dam.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.dcm.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/tombo_models
copying tombo/tombo_models/tombo.DNA.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/tombo_models
copying tombo/tombo_models/tombo.RNA.180mV.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/tombo_models
copying tombo/tombo_models/tombo.RNA.200mV.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/tombo_models
copying tombo/tombo_models/tombo.RNA.5mC.model ->
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/tombo_models
running build_ext
building 'tombo._c_dynamic_programming' extension
creating build/temp.linux-x86_64-cpython-313/tombo
x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
-I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include
-I/usr/include/python3.13 -c tombo/_c_dynamic_programming.cpp -o
build/temp.linux-x86_64-cpython-313/tombo/_c_dynamic_programming.o
x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared
-Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro
-Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection
-Wdate-time -D_FORTIFY_SOURCE=2
build/temp.linux-x86_64-cpython-313/tombo/_c_dynamic_programming.o
-L/usr/lib/x86_64-linux-gnu -o
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/_c_dynamic_programming.cpython-313-x86_64-linux-gnu.so
building 'tombo._c_helper' extension
x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
-I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include
-I/usr/include/python3.13 -c tombo/_c_helper.cpp -o
build/temp.linux-x86_64-cpython-313/tombo/_c_helper.o
x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-fstack-protector-strong -fstack-clash-protection -Wformat
-Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared
-Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro
-Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection
-Wdate-time -D_FORTIFY_SOURCE=2
build/temp.linux-x86_64-cpython-313/tombo/_c_helper.o
-L/usr/lib/x86_64-linux-gnu -o
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build/tombo/_c_helper.cpython-313-x86_64-linux-gnu.so
debian/rules execute_after_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
sphinx-build -N -bhtml docs docs/build
Running Sphinx v9.1.0
Configuration error!
Versions
========
* Platform: linux;
(Linux-6.12.74+deb13+1-cloud-amd64-x86_64-with-glibc2.42)
* Python version: 3.13.12 (CPython)
* Sphinx version: 9.1.0
* Docutils version: 0.22.4
* Jinja2 version: 3.1.6
* Pygments version: 2.19.2
Last Messages
=============
None.
Loaded Extensions
=================
None.
Traceback
=========
File "/usr/lib/python3/dist-packages/sphinx/config.py", line 611, in
eval_config_file
raise ConfigError(msg % traceback.format_exc()) from exc
sphinx.errors.ConfigError: There is a programmable error in your
configuration file:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/config.py", line 596, in
eval_config_file
exec(code, namespace) # NoQA: S102
~~~~^^^^^^^^^^^^^^^^^
File "/<<PKGBUILDDIR>>/docs/conf.py", line 32, in <module>
from sphinx.ext.autodoc import ClassDocumenter, _
ImportError: cannot import name '_' from 'sphinx.ext.autodoc'
(/usr/lib/python3/dist-packages/sphinx/ext/autodoc/__init__.py)
The full traceback has been saved in:
/tmp/sphinx-err-7uay0uor.log
To report this error to the developers, please open an issue at
<https://github.com/sphinx-doc/sphinx/issues/>. Thanks!
Please also report this if it was a user error, so that a better error message
can be provided next time.
make[1]: *** [debian/rules:19: execute_after_dh_auto_build] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:9: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit
status 2
--------------------------------------------------------------------------------
--- End Message ---
--- Begin Message ---
Source: tombo
Source-Version: 1.5.1-9
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
tombo, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated tombo package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sun, 10 May 2026 10:06:22 +0200
Source: tombo
Architecture: source
Version: 1.5.1-9
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1135512
Changes:
tombo (1.5.1-9) unstable; urgency=medium
.
* Fix Sphinx build
Closes: #1135512
* d/watch: version=5
* Standards-Version: 4.7.4 (routine-update)
* Reflow Uploaders field (cme)
* Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
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