Your message dated Wed, 13 May 2026 09:35:06 +0000
with message-id <[email protected]>
and subject line Bug#1136307: fixed in openbabel 3.1.1+dfsg-15~exp
has caused the Debian Bug report #1136307,
regarding openbabel: FTBFS with libeigen3-dev 5.0 (major version transition)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1136307: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1136307
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Package: src:openbabel
Version: 3.1.1+dfsg-14
Severity: important
Tags: sid forky ftbfs
User: [email protected]
Usertags: eigen3-5.0
Dear Maintainer,
your package depends on libeigen3-dev. The upstream released a
new major version of this mathematical library, 5.0.0. Some
basic information about new features and changes in this version
can be found here:
https://libeigen.gitlab.io/releases/5.0/
This is a major version change and may require code changes in packages
depending on eigen3. The key breaking changes include:
- Minimum required C++ standard is now C++14
- Changes in the build system integration
- Some API name changes
openbabel FTBFS with libeigen3-dev 5.0.1. The full build log is available at:
https://debusine.debian.net/debian/developers-gladk-eigen3/artifact/3759397/
Here is the most probably relevant part of the failing build log:
===========================================
- -- Detecting CXX compile features - done
- -- Eigen version .. found in /usr/include/eigen3, but at least version 2.91.0
is required
CMake Error at
/usr/share/cmake-4.3/Modules/FindPackageHandleStandardArgs.cmake:290 (message):
Could NOT find Eigen (missing: EIGEN_VERSION_OK) (Required is at least
version "2.91.0")
Call Stack (most recent call first):
/usr/share/cmake-4.3/Modules/FindPackageHandleStandardArgs.cmake:654
(_FPHSA_FAILURE_MESSAGE)
modules/FindEigen.cmake:76 (find_package_handle_standard_args)
CMakeLists.txt:49 (find_package)
- -- Configuring incomplete, errors occurred!
cd .pybuild/cpython3_3.14/build && tail -v -n \+0 CMakeCache.txt
==> CMakeCache.txt <==
# This is the CMakeCache file.
# For build in directory:
/build/reproducible-path/opengv-1.0+1git91f4b1/.pybuild/cpython3_3.14/build
# It was generated by CMake: /usr/bin/cmake
# You can edit this file to change values found and used by cmake.
# If you do not want to change any of the values, simply exit the editor.
# If you do want to change a value, simply edit, save, and exit the editor.
# The syntax for the file is as follows:
# KEY:TYPE=VALUE
# KEY is the name of a variable in the cache.
# TYPE is a hint to GUIs for the type of VALUE, DO NOT EDIT TYPE!.
# VALUE is the current value for the KEY.
===========================================
libeigen3-dev_5.0.1-1 is available in experimental.
When this package version lands into unstable (probably at the beginning
of June 2026), this bug will be increased in severity to serious.
Thanks,
Anton
-----BEGIN PGP SIGNATURE-----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=4grn
-----END PGP SIGNATURE-----
--- End Message ---
--- Begin Message ---
Source: openbabel
Source-Version: 3.1.1+dfsg-15~exp
Done: Andrius Merkys <[email protected]>
We believe that the bug you reported is fixed in the latest version of
openbabel, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andrius Merkys <[email protected]> (supplier of updated openbabel package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 13 May 2026 05:07:09 -0400
Source: openbabel
Architecture: source
Version: 3.1.1+dfsg-15~exp
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team <[email protected]>
Changed-By: Andrius Merkys <[email protected]>
Closes: 1136307
Changes:
openbabel (3.1.1+dfsg-15~exp) experimental; urgency=medium
.
* Adapt to build with libeigen3-dev 5.0.1 (Closes: #1136307)
Checksums-Sha1:
a412c32da8cba90f16fdeace5ac933dcbcb4c5f4 2834 openbabel_3.1.1+dfsg-15~exp.dsc
cbfa31de90a369335bbad0dfb7c2416d95eb787c 26260
openbabel_3.1.1+dfsg-15~exp.debian.tar.xz
60e48fac609a7f8eb587feae221df2a0a1a1abe8 22619
openbabel_3.1.1+dfsg-15~exp_source.buildinfo
Checksums-Sha256:
fa6076a2a12225497f65d40aaafde05f563d9b9cf7d932a3d6ab1aa2449ab01d 2834
openbabel_3.1.1+dfsg-15~exp.dsc
0804db4396be1f5e391d8483545bb25919de51703828f4ae129504c68c4f564d 26260
openbabel_3.1.1+dfsg-15~exp.debian.tar.xz
c90026e331130348f500a23a08a00c779a4bd8b513a549f64c16da95795244eb 22619
openbabel_3.1.1+dfsg-15~exp_source.buildinfo
Files:
848518b1df0875877d3a7aa420555efb 2834 science optional
openbabel_3.1.1+dfsg-15~exp.dsc
22955ea30b7f0553736c596e4f0228a4 26260 science optional
openbabel_3.1.1+dfsg-15~exp.debian.tar.xz
8d69f61d2533a1d2edc3e4c5b377f5ef 22619 science optional
openbabel_3.1.1+dfsg-15~exp_source.buildinfo
-----BEGIN PGP SIGNATURE-----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=Ut6S
-----END PGP SIGNATURE-----
pgpXkjOBvYpj0.pgp
Description: PGP signature
--- End Message ---