Package: profnet-isis
Version: 1.0.21-1
Severity: grave
Tags: patch upstream
Justification: renders package unusable

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Dear Maintainer,

the example shipped with profisis fails because of a bounds-error in 
profnet-isis.
profisis is not usable because of this bug. Newer versions of profnet-isis are 
fixed.
The version in Wheezy is affected only.


- -- System Information:
Debian Release: 7.0
  APT prefers stable
  APT policy: (990, 'stable'), (500, 'testing')
Architecture: amd64 (x86_64)

Kernel: Linux 3.2.0-4-amd64 (SMP w/12 CPU cores)
Locale: LANG=en_US.UTF8, LC_CTYPE=en_US.UTF8 (charmap=UTF-8) (ignored: LC_ALL 
set to en_US.UTF8)
Shell: /bin/sh linked to /bin/bash

Versions of packages profnet-isis depends on:
ii  libc6         2.13-38
ii  libgcc1       1:4.7.2-5
ii  libgfortran3  4.7.2-5
ii  libquadmath0  4.7.2-5

Versions of packages profnet-isis recommends:
ii  profisis  1.0.11-1

profnet-isis suggests no packages.

- -- no debconf information

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diff -Nru profnet-1.0.21/debian/changelog profnet-1.0.21/debian/changelog
--- profnet-1.0.21/debian/changelog	2011-11-28 15:48:19.000000000 +0100
+++ profnet-1.0.21/debian/changelog	2013-05-11 23:02:09.000000000 +0200
@@ -1,3 +1,12 @@
+profnet (1.0.21-2) stable; urgency=low
+
+  * Fixed Fortran runtime error (Actual string length is shorter than the
+    declared one for dummy argument) in profnet-isis with a new quilt
+    patch. (Closes: #012345)
+  * Fixed Debian build issue: now builds twice in a row.
+
+ -- Laszlo Kajan <lka...@rostlab.org>  Sat, 11 May 2013 22:37:45 +0200
+
 profnet (1.0.21-1) unstable; urgency=low
 
   * New upstream release
diff -Nru profnet-1.0.21/debian/patches/isis profnet-1.0.21/debian/patches/isis
--- profnet-1.0.21/debian/patches/isis	1970-01-01 01:00:00.000000000 +0100
+++ profnet-1.0.21/debian/patches/isis	2013-05-11 22:29:48.000000000 +0200
@@ -0,0 +1,23 @@
+--- a/isis.patch
++++ b/isis.patch
+@@ -1,14 +1,18 @@
+ diff -ruN -x '.*.swp' -x 'profnet*' -x .svn src/Makefile isis_dir/Makefile
+ --- src/Makefile	2010-02-10 17:55:33.923514458 +0100
+ +++ isis_dir/Makefile	2010-02-26 11:22:10.199787414 +0100
+-@@ -1,6 +1,6 @@
++@@ -1,9 +1,9 @@
+  #=====================================================================
+  F77			=	gfortran
+ -BIN			=	profnet_prof
+ +BIN			=	profnet_isis
+  #=====================================================================
+  ARCH			=	LINUX
+- FFLAGS          	:= 	-O3 -fbounds-check -Wuninitialized
++-FFLAGS          	:= 	-O3 -fbounds-check -Wuninitialized
+++FFLAGS          	:= 	-O3 -Wuninitialized
++ FFLAGS          	:= 	$(FFLAGS) -Wall -Wno-unused
++ #=====================================================================
++ NN_OBJS			:= prof.f lib-prof.f lib-sys-$(ARCH).f
+ diff -ruN -x '.*.swp' -x 'profnet*' -x .svn src/profPar.f isis_dir/profPar.f
+ --- src/profPar.f	2010-02-23 10:17:25.315661972 +0100
+ +++ isis_dir/profPar.f	2010-02-26 11:20:32.863648133 +0100
diff -Nru profnet-1.0.21/debian/patches/series profnet-1.0.21/debian/patches/series
--- profnet-1.0.21/debian/patches/series	2011-06-14 19:10:14.000000000 +0200
+++ profnet-1.0.21/debian/patches/series	2013-05-11 22:48:17.000000000 +0200
@@ -0,0 +1 @@
+isis
diff -Nru profnet-1.0.21/debian/rules profnet-1.0.21/debian/rules
--- profnet-1.0.21/debian/rules	2011-06-21 14:57:39.000000000 +0200
+++ profnet-1.0.21/debian/rules	2013-05-11 22:49:59.000000000 +0200
@@ -32,7 +32,7 @@
 	rm -f build-stamp configure-stamp
 
 	# Add here commands to clean up after the build process.
-	$(MAKE) clean
+	$(MAKE) distclean
 
 	dh_clean 
 
diff -Nru profnet-1.0.21/debian/changelog profnet-1.0.21/debian/changelog
--- profnet-1.0.21/debian/changelog	2011-11-28 15:48:19.000000000 +0100
+++ profnet-1.0.21/debian/changelog	2013-05-11 23:02:09.000000000 +0200
@@ -1,3 +1,12 @@
+profnet (1.0.21-2) stable; urgency=low
+
+  * Fixed Fortran runtime error (Actual string length is shorter than the
+    declared one for dummy argument) in profnet-isis with a new quilt
+    patch. (Closes: #012345)
+  * Fixed Debian build issue: now builds twice in a row.
+
+ -- Laszlo Kajan <lka...@rostlab.org>  Sat, 11 May 2013 22:37:45 +0200
+
 profnet (1.0.21-1) unstable; urgency=low
 
   * New upstream release
diff -Nru profnet-1.0.21/debian/patches/isis profnet-1.0.21/debian/patches/isis
--- profnet-1.0.21/debian/patches/isis	1970-01-01 01:00:00.000000000 +0100
+++ profnet-1.0.21/debian/patches/isis	2013-05-11 22:29:48.000000000 +0200
@@ -0,0 +1,23 @@
+--- a/isis.patch
++++ b/isis.patch
+@@ -1,14 +1,18 @@
+ diff -ruN -x '.*.swp' -x 'profnet*' -x .svn src/Makefile isis_dir/Makefile
+ --- src/Makefile	2010-02-10 17:55:33.923514458 +0100
+ +++ isis_dir/Makefile	2010-02-26 11:22:10.199787414 +0100
+-@@ -1,6 +1,6 @@
++@@ -1,9 +1,9 @@
+  #=====================================================================
+  F77			=	gfortran
+ -BIN			=	profnet_prof
+ +BIN			=	profnet_isis
+  #=====================================================================
+  ARCH			=	LINUX
+- FFLAGS          	:= 	-O3 -fbounds-check -Wuninitialized
++-FFLAGS          	:= 	-O3 -fbounds-check -Wuninitialized
+++FFLAGS          	:= 	-O3 -Wuninitialized
++ FFLAGS          	:= 	$(FFLAGS) -Wall -Wno-unused
++ #=====================================================================
++ NN_OBJS			:= prof.f lib-prof.f lib-sys-$(ARCH).f
+ diff -ruN -x '.*.swp' -x 'profnet*' -x .svn src/profPar.f isis_dir/profPar.f
+ --- src/profPar.f	2010-02-23 10:17:25.315661972 +0100
+ +++ isis_dir/profPar.f	2010-02-26 11:20:32.863648133 +0100
diff -Nru profnet-1.0.21/debian/patches/series profnet-1.0.21/debian/patches/series
--- profnet-1.0.21/debian/patches/series	2011-06-14 19:10:14.000000000 +0200
+++ profnet-1.0.21/debian/patches/series	2013-05-11 22:48:17.000000000 +0200
@@ -0,0 +1 @@
+isis
diff -Nru profnet-1.0.21/debian/rules profnet-1.0.21/debian/rules
--- profnet-1.0.21/debian/rules	2011-06-21 14:57:39.000000000 +0200
+++ profnet-1.0.21/debian/rules	2013-05-11 22:49:59.000000000 +0200
@@ -32,7 +32,7 @@
 	rm -f build-stamp configure-stamp
 
 	# Add here commands to clean up after the build process.
-	$(MAKE) clean
+	$(MAKE) distclean
 
 	dh_clean 
 

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