Package: wnpp Severity: wishlist Owner: Andreas Tille <[email protected]>
* Package name : murasaki Version : 1.68.6 Upstream Author : Kris Popendorf <[email protected]> * URL : http://murasaki.dna.bio.keio.ac.jp/wiki/ * License : GPL Programming Lang: C++, Perl Description : homology detection tool across multiple large genomes Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering. . Murasaki is an anchor alignment software, which is * exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 52 wall minutes)) * scalable (Arbitrarily parallelizable across multiple nodes using MPI. Even a single node with 16GB of ram can handle over 1Gbp of sequence.) * unlimited pattern length * repeat tolerant * intelligent noise reduction The package will be maintained by the Debian Med team at Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/murasaki/trunk/ -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected]
