> On Wed, Nov 26, 2014 at 3:49 AM, Charles Plessy <ple...@debian.org> wrote: > > > in recent versions of samtools, the mpileup command has a new option to > > specify the coverage at run time. > > > > Would it be fine to drop our patch that was raising the default coverage > > cap from 8,000 to 1,000,000 ? If yes, do you think we need to mention it > > as a NEWS entry ?
Le Wed, Nov 26, 2014 at 02:27:22PM -0500, Dominique Belhachemi a écrit : > > I think we still need the patch. samtools depth doesn't support the -d flag. Hi Dominique, in my latest upload, I delete the patches by mistake. But on the other hand, I see that you solved the issue upstream in the meantime. https://github.com/samtools/samtools/pull/375 Unless we need a new upload before version 1.3, shall we just wait ? Have a nice day, -- Charles -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org