There are actually two alternatives to fix this bug on the upstream side: * Either convert the .dox files actual man pages and then use these directly (i.e, no longer invoking doxygen to create them). Since man pages are actually text files this would be also a proper source format to apply changes.
* Or create two different doxygen files: one for creating the man pages only, and another one to create the reference documentation and handle these accordingly. Best, Gert