Dear all,
Now that gcc-7 is available directly in sid, I tried again using the
following steps:
1.
start from a clean sid
2.
install g++-7 using |apt-get install -y g++-7|
3. setup gcc and g++ alternatives :
|update-alternatives --install /usr/bin/gcc gcc /usr/bin/gcc-6 10
update-alternatives --install /usr/bin/gcc gcc /usr/bin/gcc-7 20
update-alternatives --install /usr/bin/g++ g++ /usr/bin/g++-6 10
update-alternatives --install /usr/bin/g++ g++ /usr/bin/g++-7 20
update-alternatives --install /usr/bin/cc cc /usr/bin/gcc 30
update-alternatives --set cc /usr/bin/gcc update-alternatives --install
/usr/bin/c++ c++ /usr/bin/g++ 30 update-alternatives --set c++
/usr/bin/g++ update-alternatives --config gcc sudo update-alternatives
--config g++ |
1. build the package (using |gbp buildpackage --git-ignore-new|)
The package does not build and stop with this error:
|... [ 52%] Building CXX object
imaging/components/itkimage/CMakeFiles/component-itkimage.dir/ItkImageComponent.cpp.o
cd
/home/promayon/docker/camitk-debian/camitk-build/imaging/components/itkimage
&& /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -DQT_CORE_LIB
-DQT_GUI_LIB -DQT_HELP_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG
-DQT_OPENGLEXTENSIONS_LIB -DQT_OPENGL_LIB -DQT_UITOOLS_LIB
-DQT_WIDGETS_LIB -DQT_XMLPATTERNS_LIB -DQT_XML_LIB
-D_SCL_SECURE_NO_WARNINGS -Dcomponent_itkimage_EXPORTS
-DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)"
-DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)"
-DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)"
-DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)"
-DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)"
-DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)"
-DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)"
-DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)"
-DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)"
-DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)"
-DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)"
-I/home/promayon/docker/camitk-debian/camitk-build/imaging/components/itkimage/component-itkimage_autogen/include
-I/home/promayon/docker/camitk-debian/camitk-build/imaging/components/itkimage/ITKIOFactoryRegistration
-I/usr/include/hdf5/serial -I/usr/include/dcmtk/dcmseg
-I/usr/include/dcmtk/dcmfg -I/usr/include/dcmtk/dcmiod
-I/usr/include/dcmtk/dcmrt -I/usr/include/dcmtk/dcmpstat
-I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmwlm
-I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmsr
-I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmtls
-I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg
-I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle
-I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/oflog
-I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/config
-I/usr/include/x86_64-linux-gnu -I/usr/include/nifti
-I/usr/include/gdcm-2.6 -I/usr/include/double-conversion -isystem
/usr/include/ITK-4.10 -I/usr/include/vtk-6.3 -I/usr/include/freetype2
-I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi
-I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent
-I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include
-I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/include/python2.7
-I/usr/include/hdf5/openmpi -I/usr/include/libxml2
-I/usr/include/jsoncpp -I/usr/include/tcl
-I/home/promayon/docker/camitk-debian/camitk-build/include/camitk-4.0
-I/home/promayon/docker/camitk-debian/camitk-build/include/camitk-4.0/libraries
-I/home/promayon/docker/camitk-debian/camitk-build/include/camitk-4.0/libraries/qtpropertybrowser
-I/home/promayon/docker/camitk-debian/camitk-build/include/camitk-4.0/libraries/camitkcore
-I/home/promayon/.config/CamiTK/include/camitk-4.0 -isystem
/usr/include/x86_64-linux-gnu/qt5 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtXml -isystem
/usr/include/x86_64-linux-gnu/qt5/QtXmlPatterns -isystem
/usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem
/usr/include/x86_64-linux-gnu/qt5/QtHelp -isystem
/usr/include/x86_64-linux-gnu/qt5/QtUiTools -isystem
/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem
/usr/include/x86_64-linux-gnu/qt5/QtOpenGLExtensions
-I/home/promayon/docker/camitk-debian/camitk-build/imaging/components/itkimage
-I/home/promayon/docker/camitk-debian/imaging/components/itkimage -g -O2
-fdebug-prefix-map=/home/promayon/docker/camitk-debian=.
-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
-D_FORTIFY_SOURCE=2 -std=c++11 -w -fPIC -fPIC -fPIC -std=gnu++11 -o
CMakeFiles/component-itkimage.dir/ItkImageComponent.cpp.o -c
/home/promayon/docker/camitk-debian/imaging/components/itkimage/ItkImageComponent.cpp
In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, from
/usr/include/ITK-4.10/itkNumericTraits.h:51, from
/usr/include/ITK-4.10/itkConceptChecking.h:32, from
/usr/include/ITK-4.10/itkAtomicInt.h:38, from
/usr/include/ITK-4.10/itkLightObject.h:25, from
/usr/include/ITK-4.10/itkObject.h:31, from
/usr/include/ITK-4.10/itkLightProcessObject.h:21, from
/usr/include/ITK-4.10/itkImageIOBase.h:24, from
/usr/include/ITK-4.10/itkImageFileReader.h:24, from
/home/promayon/docker/camitk-debian/imaging/components/itkimage/ItkImageComponent.cpp:41:
/usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about
this gcc" # error "Dunno about this gcc" |
This seems the same as bug #853386 [1] and #853602 [2] and seems to be a
recurrent problem when the major gcc version changes.
Should this bug not be reassigned to src:insighttoolkit4?
Kind Regards,
Mahnu
[1] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=853386
[2] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=853602
