Source: itksnap Version: 3.6.0-3 Severity: serious User: ubuntu-de...@lists.ubuntu.com Usertags: origin-ubuntu focal
Dear maintainers,
The itksnap package is not buildable in unstable with the current
insighttoolkit4 and gdcm:
[...]
[100%] Building CXX object
CMakeFiles/Test_OrientationWidget.dir/GUI/Renderer/OrientationWidget/Test_OrientationWidget/moc_OrientationWidgetGUI.cpp.o
/usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -DQT_CONCURRENT_LIB
-DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB
-DQT_QML_LIB -DQT_WIDGETS_LIB
-DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)"
-DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)"
-DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)"
-DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)"
-DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)"
-DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)"
-DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)"
-DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)"
-DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)"
-DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)"
-DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)"
-I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/ITKIOFactoryRegistration
-I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti
-I/usr/include/double-conversion -I/usr/include/vtk-6.3
-I/usr/include/freetype2 -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi
-I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/include/hdf5/openmpi
-I/usr/include/libxml2 -I/usr/include/jsoncpp -I/usr/include/python2.7
-I/usr/lib/cmake/ITK-4.12/Utilities/zlib -I/<<PKGBUILDDIR>>/Common
-I/<<PKGBUILDDIR>>/Common/ITKExtras -I/<<PKGBUILDDIR>>/Logic
-I/<<PKGBUILDDIR>>/Logic/Common -I/<<PKGBUILDDIR>>/Logic/Framework
-I/<<PKGBUILDDIR>>/Logic/ImageWrapper -I/<<PKGBUILDDIR>>/Logic/LevelSet
-I/<<PKGBUILDDIR>>/Logic/Mesh -I/<<PKGBUILDDIR>>/Logic/Preprocessing
-I/<<PKGBUILDDIR>>/Logic/Preprocessing/GMM
-I/<<PKGBUILDDIR>>/Logic/Preprocessing/Texture
-I/<<PKGBUILDDIR>>/Logic/RLEImage -I/<<PKGBUILDDIR>>/Logic/Slicing
-I/<<PKGBUILDDIR>>/Submodules/c3d/itkextras/RandomForest
-I/<<PKGBUILDDIR>>/Submodules/c3d/api -I/<<PKGBUILDDIR>>/Submodules/greedy/src
-I/<<PKGBUILDDIR>>/GUI -I/<<PKGBUILDDIR>>/GUI/Model
-I/<<PKGBUILDDIR>>/GUI/Renderer
-I/<<PKGBUILDDIR>>/GUI/Renderer/OrientationWidget/Reorient
-I/<<PKGBUILDDIR>>/GUI/Qt -I/<<PKGBUILDDIR>>/GUI/Qt/Components
-I/<<PKGBUILDDIR>>/GUI/Qt/Coupling -I/<<PKGBUILDDIR>>/GUI/Qt/External
-I/<<PKGBUILDDIR>>/GUI/Qt/External/ColorWheel
-I/<<PKGBUILDDIR>>/GUI/Qt/ModelView -I/<<PKGBUILDDIR>>/GUI/Qt/Testing
-I/<<PKGBUILDDIR>>/GUI/Qt/View -I/<<PKGBUILDDIR>>/GUI/Qt/Windows
-I/<<PKGBUILDDIR>>/GUI/Qt/Windows/MeshExportWizard
-I/<<PKGBUILDDIR>>/GUI/Qt/Windows/Registration -I/<<PKGBUILDDIR>>/Testing/Logic
-I/<<PKGBUILDDIR>>/Testing/GUI/Qt -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu
-isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -isystem
/usr/include/x86_64-linux-gnu/qt5 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem
/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem
/usr/include/x86_64-linux-gnu/qt5/QtConcurrent -isystem
/usr/include/x86_64-linux-gnu/qt5/QtQml -isystem
/usr/include/x86_64-linux-gnu/qt5/QtNetwork -g -O2
-fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat
-Werror=format-security -fPIC -funroll-loops -ftree-vectorize -Wdate-time
-D_FORTIFY_SOURCE=2 -fPIC -std=gnu++11 -o
CMakeFiles/Test_OrientationWidget.dir/GUI/Renderer/OrientationWidget/Test_OrientationWidget/moc_OrientationWidgetGUI.cpp.o
-c
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/GUI/Renderer/OrientationWidget/Test_OrientationWidget/moc_OrientationWidgetGUI.cpp
In file included from /<<PKGBUILDDIR>>/GUI/Model/ColorLabelPropertyModel.h:6,
from /<<PKGBUILDDIR>>/Logic/Framework/GlobalState.h:57,
from /<<PKGBUILDDIR>>/GUI/Qt/Windows/MainImageWindow.h:31,
from /<<PKGBUILDDIR>>/GUI/Qt/main.cxx:15:
/<<PKGBUILDDIR>>/Logic/Common/ColorLabelTable.h:60:39: warning: dynamic
exception specifications are deprecated in C++11 [-Wdeprecated]
60 | void LoadFromFile(const char *file) throw(itk::ExceptionObject);
| ^~~~~
/<<PKGBUILDDIR>>/Logic/Common/ColorLabelTable.h:61:43: warning: dynamic
exception specifications are deprecated in C++11 [-Wdeprecated]
61 | void SaveToFile(const char *file) const throw(itk::ExceptionObject);
| ^~~~~
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
make[2]: *** [CMakeFiles/Makefile2:439:
CMakeFiles/Test_OrientationWidget.dir/all] Error 2
make[2]: *** Waiting for unfinished jobs....
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
make[2]: *** [CMakeFiles/Makefile2:869: CMakeFiles/ITK-SNAP.dir/all] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
make[1]: *** [Makefile:166: all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
dh_auto_build: cd obj-x86_64-linux-gnu && make -j4 "INSTALL=install
--strip-program=true" returned exit code 2
[...]
(https://launchpad.net/ubuntu/+source/itksnap/3.6.0-3build1/+build/18031852)
It is unclear to me what is failing, since there are no errors in the build
log prior to the errors from make.
Please note that itksnap has been removed from testing at some point,
allowing the new insighttoolkit4 + gdcm to transition there, but somehow
this never resulted in an RC bug filed against itksnap.
--
Steve Langasek Give me a lever long enough and a Free OS
Debian Developer to set it on, and I can move the world.
Ubuntu Developer https://www.debian.org/
slanga...@ubuntu.com vor...@debian.org
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