Source: libstatgen Version: 1.0.14-5 Severity: serious Justification: FTBFS on amd64 Tags: bullseye sid ftbfs Usertags: ftbfs-20200222 ftbfs-bullseye
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[1]: Entering directory '/<<PKGBUILDDIR>>' > mkdir -p debian/libstatgen-dev/usr/include/libStatGen/ > cp -L include/* debian/libstatgen-dev/usr/include/libStatGen/ > ln -s libStatGen.so.0 libStatGen.so > d-shlibmove --commit \ > --multiarch \ > --devunversioned \ > --exclude-a \ > libStatGen.so > Library package automatic movement utility > set -e > install -d -m 755 debian/libstatgen-dev/usr/lib/x86_64-linux-gnu > install -d -m 755 debian/libstatgen0/usr/lib/x86_64-linux-gnu > mv ./libStatGen.la debian/libstatgen-dev/usr/lib/x86_64-linux-gnu || true > mv ./libStatGen.so debian/libstatgen-dev/usr/lib/x86_64-linux-gnu > mv /<<PKGBUILDDIR>>/libStatGen.so.0 > debian/libstatgen0/usr/lib/x86_64-linux-gnu > PKGDEV=libstatgen-dev > PKGSHL=libstatgen0 > mv: cannot stat './libStatGen.la': No such file or directory > make[1]: Leaving directory '/<<PKGBUILDDIR>>' > dh_installdocs > dh_installchangelogs > dh_perl > dh_link > dh_strip_nondeterminism > dh_compress > dh_fixperms > dh_missing > dh_strip > dh_makeshlibs > dpkg-gensymbols: warning: some new symbols appeared in the symbols file: see > diff output below > dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols > file: see diff output below > dpkg-gensymbols: warning: debian/libstatgen0/DEBIAN/symbols doesn't match > completely debian/libstatgen0.symbols > --- debian/libstatgen0.symbols (libstatgen0_1.0.14-5_amd64) > +++ dpkg-gensymbolsdde9Ud 2020-02-23 02:40:44.569405938 +0000 > @@ -1628,8 +1628,13 @@ > (c++)"VectorFunc::VectorFunc()@Base" 1.0.14 > (c++)"VectorFunc::VectorFunc(double (*)(Vector&))@Base" 1.0.14 > (c++)"VectorFunc::~VectorFunc()@Base" 1.0.14 > + _ZN11MiniDeflate14OutputLiteralsERPhiS1_RiP8_IO_FILE@Base 1.0.14-5 > + > _ZNSt10_HashtableINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_SaIS5_ENSt8__detail9_IdentityESt8equal_toIS5_ESt4hashIS5_ENS7_18_Mod_range_hashingENS7_20_Default_ranged_hashENS7_20_Prime_rehash_policyENS7_17_Hashtable_traitsILb1ELb1ELb1EEEE9_M_rehashEmRKm@Base > 1.0.14-5 > + > _ZNSt6vectorIcSaIcEE17_M_realloc_insertIJcEEEvN9__gnu_cxx17__normal_iteratorIPcS1_EEDpOT_@Base > 1.0.14-5 > > _ZNSt6vectorIfSaIfEE17_M_realloc_insertIJRKfEEEvN9__gnu_cxx17__normal_iteratorIPfS1_EEDpOT_@Base > 1.0.14 > > _ZNSt6vectorIfSaIfEE17_M_realloc_insertIJfEEEvN9__gnu_cxx17__normal_iteratorIPfS1_EEDpOT_@Base > 1.0.14 > + > _ZNSt6vectorIhSaIhEE17_M_realloc_insertIJRKhEEEvN9__gnu_cxx17__normal_iteratorIPhS1_EEDpOT_@Base > 1.0.14-5 > + > _ZNSt6vectorIhSaIhEE17_M_realloc_insertIJhEEEvN9__gnu_cxx17__normal_iteratorIPhS1_EEDpOT_@Base > 1.0.14-5 > > _ZNSt6vectorIiSaIiEE17_M_realloc_insertIJiEEEvN9__gnu_cxx17__normal_iteratorIPiS1_EEDpOT_@Base > 1.0.14 > bQualityConvertor@Base 1.0.14 > (c++)"baseQualityConvertor::baseQualityConvertor()@Base" 1.0.14 > @@ -1711,7 +1716,7 @@ > (c++)"std::_Bvector_base<std::allocator<bool> >::_M_deallocate()@Base" > 1.0.14 > (c++)"std::_Deque_base<SamRecord*, std::allocator<SamRecord*> > >::_M_initialize_map(unsigned long)@Base" 1.0.14 > (c++)"std::_Hashtable<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> >, > std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::__detail::_Identity, > std::equal_to<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::hash<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> > >, > std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, > std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<true, > true, true> >::_M_find_before_node(unsigned long, > std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > const&, unsigned long) const@Base" 1.0.14 > - (c++)"std::_Hashtable<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> >, > std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::__detail::_Identity, > std::equal_to<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::hash<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> > >, > std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, > std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<true, > true, true> >::_M_insert_unique_node(unsigned long, unsigned long, > std::__detail::_Hash_node<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> >, true>*, unsigned long)@Base" > 1.0.14 > +#MISSING: 1.0.14-5# (c++)"std::_Hashtable<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> >, > std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::__detail::_Identity, > std::equal_to<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::hash<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> > >, > std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, > std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<true, > true, true> >::_M_insert_unique_node(unsigned long, unsigned long, > std::__detail::_Hash_node<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> >, true>*, unsigned long)@Base" > 1.0.14 > (c++)"std::_Hashtable<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> >, > std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::__detail::_Identity, > std::equal_to<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::hash<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> > >, > std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, > std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<true, > true, true> >::clear()@Base" 1.0.14 > (c++)"std::_Hashtable<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> >, > std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::__detail::_Identity, > std::equal_to<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::hash<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> > >, > std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, > std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<true, > true, true> >::find(std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > const&)@Base" 1.0.14 > (c++)"std::_Hashtable<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> >, > std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::__detail::_Identity, > std::equal_to<std::__cxx11::basic_string<char, std::char_traits<char>, > std::allocator<char> > >, std::hash<std::__cxx11::basic_string<char, > std::char_traits<char>, std::allocator<char> > >, > std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, > std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<true, > true, true> >::~_Hashtable()@Base" 1.0.14 > dh_makeshlibs: error: failing due to earlier errors > make: *** [debian/rules:11: binary] Error 25 The full build log is available from: http://qa-logs.debian.net/2020/02/22/libstatgen_1.0.14-5_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures.