Package: wnpp Severity: wishlist Subject: ITP: nanolyse -- remove lambda phage reads from a fastq file Package: wnpp Owner: Andreas Tille <ti...@debian.org> Severity: wishlist
* Package name : nanolyse Version : 1.1.1 Upstream Author : Wouter De Coster * URL : https://github.com/wdecoster/nanolyse * License : GPL-3+ Programming Lang: Python Description : remove lambda phage reads from a fastq file NanoLyse is a tool for rapid removal of contaminant DNA, using the Minimap2 aligner through the mappy Python binding. A typical application would be the removal of the lambda phage control DNA fragment supplied by ONT, for which the reference sequence is included in the package. However, this approach may lead to unwanted loss of reads from regions highly homologous to the lambda phage genome. Remark: This package is maintained by Debian Med Packaging Team at https://salsa.debian.org/med-team/nanolyse
