Source: libbio-db-embl-perl Version: 1.7.4-2 Severity: serious Justification: FTBFS on amd64 Tags: bullseye sid ftbfs Usertags: ftbfs-20201226 ftbfs-bullseye
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[1]: Entering directory '/<<PKGBUILDDIR>>' > PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" > "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', > 'blib/arch')" t/*.t > t/00-compile.t ........... > 1..1 > ok 1 - Bio/DB/EMBL.pm loaded ok > ok > t/author-mojibake.t ...... skipped: these tests are for testing by the author > t/author-pod-coverage.t .. skipped: these tests are for testing by the author > t/author-pod-syntax.t .... skipped: these tests are for testing by the author > > ------------- EXCEPTION ------------- > MSG: EMBL stream with no ID. Not embl in my book > STACK Bio::SeqIO::embl::next_seq /usr/share/perl5/Bio/SeqIO/embl.pm:205 > STACK Bio::DB::WebDBSeqI::get_Seq_by_acc > /usr/share/perl5/Bio/DB/WebDBSeqI.pm:202 > STACK toplevel t/EMBL.t:27 > ------------------------------------- > > # Looks like your test exited with 255 just after 2. > t/EMBL.t ................. > 1..16 > ok 1 - use Bio::DB::EMBL; > ok 2 > Dubious, test returned 255 (wstat 65280, 0xff00) > Failed 14/16 subtests > > Test Summary Report > ------------------- > t/EMBL.t (Wstat: 65280 Tests: 2 Failed: 0) > Non-zero exit status: 255 > Parse errors: Bad plan. You planned 16 tests but ran 2. > Files=5, Tests=3, 1 wallclock secs ( 0.02 usr 0.00 sys + 0.29 cusr 0.02 > csys = 0.33 CPU) > Result: FAIL > Failed 1/5 test programs. 0/3 subtests failed. > make[1]: *** [Makefile:853: test_dynamic] Error 255 > make[1]: Leaving directory '/<<PKGBUILDDIR>>' > dh_auto_test: error: make -j4 test TEST_VERBOSE=1 returned exit code 2 The full build log is available from: http://qa-logs.debian.net/2020/12/26/libbio-db-embl-perl_1.7.4-2_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please marking it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with me so that we can identify if something relevant changed in the meantime. About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures.
