Source: metastudent-data, metastudent Control: found -1 metastudent-data/2.0.1-5 Control: found -1 metastudent/2.0.1-8 Severity: serious Tags: sid bullseye X-Debbugs-CC: debian...@lists.debian.org User: debian...@lists.debian.org Usertags: breaks needs-update
Dear maintainer(s), With a recent upload (60 days ago) of metastudent-data the autopkgtest of metastudent fails in testing when that autopkgtest is run with the binary packages of metastudent-data from unstable. It passes when run with only packages from testing. In tabular form: pass fail metastudent-data from testing 2.0.1-5 metastudent from testing 2.0.1-8 all others from testing from testing I copied some of the output at the bottom of this report. Currently this regression is blocking the migration of metastudent-data to testing [1]. Due to the nature of this issue, I filed this bug report against both packages. Can you please investigate the situation and reassign the bug to the right package? More information about this bug and the reason for filing it can be found on https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation Paul [1] https://qa.debian.org/excuses.php?package=metastudent-data https://ci.debian.net/data/autopkgtest/testing/amd64/m/metastudent/10073288/log.gz autopkgtest [10:33:51]: test run-unit-test: [----------------------- The Rost Lab recommends you install the pp-popularity-contest package that provides pp_popcon_cnt: sudo apt-get install pp-popularity-contest Error occurred: Exception Creating tmpDir... Using /tmp/autopkgtest-lxc.27xrgf95/downtmp/autopkgtest_tmp/metastudentr2yep04q Copying input file to tmpDir... Loading Gene Ontology... Running Blast MFO !!!Error!!! /usr/bin/blastpgp -i /tmp/autopkgtest-lxc.27xrgf95/downtmp/autopkgtest_tmp/metastudentr2yep04q/fasta_splits/split_0.fasta -o /tmp/autopkgtest-lxc.27xrgf95/downtmp/autopkgtest_tmp/metastudentr2yep04q/fasta_splits/split_0.fasta.blast -d /usr/share/metastudent-data/dataset_201401/MFO/goasp.fasta -e 1.0 -j 3 -b 1000 -v 1000 1>/tmp/autopkgtest-lxc.27xrgf95/downtmp/autopkgtest_tmp/metastudentr2yep04q/fasta_splits/split_0.fasta.blast.out 2>/tmp/autopkgtest-lxc.27xrgf95/downtmp/autopkgtest_tmp/metastudentr2yep04q/fasta_splits/split_0.fasta.blast.err 255 Deleting temp directories... ====== Metastudent finished ====== Traceback (most recent call last): File "/usr/bin/metastudent", line 775, in <module> runIt(tempfile, inputFastaFilePath, outputFilePath, outputBlast, blastKickstartDatabasePaths, File "/usr/bin/metastudent", line 202, in runIt runBlast(fastaFilePathLocal, database, blastOutputFilePathLocal, tmpDirPath, configMap["BLAST_EVAL_%s" % ( File "/usr/lib/python3/dist-packages/metastudentPkg/runMethods.py", line 46, in runBlast raise Exception Exception autopkgtest [10:33:53]: test run-unit-test: -----------------------]
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