Package: wnpp Severity: wishlist Subject: ITP: bamclipper -- Remove gene-specific primer sequences from SAM/BAM alignments Package: wnpp Owner: Andreas Tille <ti...@debian.org> Severity: wishlist
* Package name : bamclipper Version : 1.0.0 Upstream Author : Chun Hang Au * URL : https://github.com/tommyau/bamclipper * License : MIT Programming Lang: (C, C++, C#, Perl, Python, etc.) Description : Remove gene-specific primer sequences from SAM/BAM alignments Remove gene-specific primer sequences from SAM/BAM alignments of PCR amplicons by soft-clipping. . bamclipper.sh soft-clips gene-specific primers from BAM alignment file based on genomic coordinates of primer pairs in BEDPE format. Remark: This package is maintained by Debian Med Packaging Team at https://salsa.debian.org/med-team/bamclipper
