Control: tags -1 - ftbfs
On 7/8/22 09:03, Antonio Valentino wrote:
I'm not able to reproduce the issue in sid.
I cannot reproduce the FTBFS anymore either, tagging accordingly.
Both the package build and autopkgtest seem to work with rasterionv1.3.0
I can reproduce it in bookworm chroot with python3-rasterio from
unstable like the debci environment.
Start with an uptodate bookworm chroot and login to it:
sudo cowbuilder --update \
--basepath /var/cache/pbuilder/base-bookworm.cow/
sudo cowbuilder --login \
--basepath /var/cache/pbuilder/base-bookworm.cow/
Get the source package and install dependencies:
cd /tmp/buildd
sed -i 's/^#deb/deb/g' /etc/apt/sources.list
apt update && apt source pyresample
cd pyresample-1.23.0/
apt build-dep pyresample
apt install python3-pyresample python-pyresample-test python3-all
Install autopkgtest packages:
apt install autopkgtest newpid
Run autopkgtest with only testing versions of packages:
newpid autopkgtest --no-built-binaries \
--output-dir ../autopkgtest.out \
--summary ../autopkgtest.summary \
-- autopkgtest-virt-null
This autopkgtest run succeeds.
Now add python3-rasterio from unstable:
echo "deb http://ftp.nl.debian.org/debian/ unstable main" \
>> /etc/apt/sources.list
apt update && apt install python3-rasterio
Run autopkgtest again:
rm -rfv ../autopkgtest.*
newpid autopkgtest --no-built-binaries \
--output-dir ../autopkgtest.out \
--summary ../autopkgtest.summary \
-- autopkgtest-virt-null
This run fails like the one on debci.
Just importing rasterio fails:
python3
>>> import rasterio
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/usr/lib/python3/dist-packages/rasterio/__init__.py", line 14,
in <module>
from rasterio.crs import CRS
File "rasterio/crs.pyx", line 1, in init rasterio.crs
File "rasterio/_base.pyx", line 22, in init rasterio._base
File "/usr/lib/python3/dist-packages/rasterio/dtypes.py", line 10,
in <module>
from rasterio.env import GDALVersion
File "/usr/lib/python3/dist-packages/rasterio/env.py", line 16, in
<module>
from rasterio._env import (
File "rasterio/_env.pyx", line 1, in init rasterio._env
ImportError:
/usr/lib/python3/dist-packages/rasterio/_filepath.cpython-310-x86_64-linux-gnu.so:
undefined symbol: VSIAllocFilesystemPluginCallbacksStruct
But it succeeds once libgdal31 from unstable is also used:
apt install libgdal31
python3
>>> import rasterio
>>> rasterio._show_versions.show_versions()
rasterio info:
rasterio: 1.3.0
GDAL: 3.5.1
PROJ: 9.0.1
GEOS: 3.11.0
PROJ DATA: /root/.local/share/proj:/usr/share/proj
GDAL DATA: None
System:
python: 3.10.5 (main, Jun 8 2022, 09:26:22) [GCC 11.3.0]
executable: /usr/bin/python3
machine: Linux-5.10.0-15-amd64-x86_64-with-glibc2.33
Python deps:
affine: 2.3.1
attrs: None
certifi: 2020.06.20
click: 8.0.3
cligj: 0.7.2
cython: 0.29.30
numpy: 1.21.5
snuggs: 1.4.7
click-plugins: None
setuptools: 59.6.0
> E ImportError:
/usr/lib/python3/dist-packages/rasterio/_filepath.cpython-39-x86_64-linux-gnu.so:
undefined symbol: VSIAllocFilesystemPluginCallbacksStruct
could it be a problem related to a mismatch with the GDAL version?
That's possible, the undefined symbols issue has been reported upstream:
https://github.com/rasterio/rasterio/issues/2507
Any idea on how to proceed?
Rebuilding rasterio with GDAL 3.5.1 seems to fix the symbol issue, let's
start there.
Kind Regards,
Bas
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