Source: zalign
Version: 0.9.1-6
Severity: serious
User: debian...@lists.debian.org
Usertags: fails-always

Dear maintainer(s),

You recently added an autopkgtest to your package zalign, great. However, it fails. Currently this failure is blocking the migration to testing [1]. Can you please investigate the situation and fix it?

I copied some of the output at the bottom of this report.

More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation

Paul

[1] https://qa.debian.org/excuses.php?package=zalign

https://ci.debian.net/data/autopkgtest/testing/armhf/z/zalign/23914703/log.gz

Running Tests
Test 1

Stage 1: Distribute data to all nodes
-------------------------------------

 # File parameters

     S sequence: 104 characters
     Filename:   dd

     T sequence: 104 characters
     Filename:   rt

 # Performance parameters

     Number of 'split' submatrices:  1
     Available nodes:                1
     Horizontal block divisions:    10
     Vertical block divisions:      10

 # Scoring parameters

     Match:          1
     Mismatch:      -3
     Gap Opening:   -5
     Gap Extension: -2


Stage 2: Find best scores
-------------------------

  Showing progress information for root node (rank 0):
split 1/1: | | 0%* | 1%* | 2%** | 3%** | 4%** | 5%*** | 6%*** | 7%**** | 8%**** | 9%**** | 10%***** | 11%***** | 12%****** | 13%****** | 14%****** | 15%******* | 16%******* | 17%******** | 18%******** | 19%******** | 20%********* | 21%********* | 22%********** | 23%********** | 24%********** | 25%*********** | 26%*********** | 27%************ | 28%************ | 29%************ | 30%************* | 31%************* | 32%************** | 33%************** | 34%************** | 35%*************** | 36%*************** | 37%**************** | 38%**************** | 39%**************** | 40%***************** | 41%***************** | 42%****************** | 43%****************** | 44%****************** | 45%******************* | 46%******************* | 47%******************** | 48%******************** | 49%******************** | 50%********************* | 51%********************* | 52%********************** | 53%********************** | 54%********************** | 55%*********************** | 56%*********************** | 57%************************ | 58%************************ | 59%************************ | 60%************************* | 61%************************* | 62%************************** | 63%************************** | 64%************************** | 65%*************************** | 66%*************************** | 67%**************************** | 68%**************************** | 69%**************************** | 70%***************************** | 71%***************************** | 72%****************************** | 73%****************************** | 74%****************************** | 75%******************************* | 76%******************************* | 77%******************************** | 78%******************************** | 79%******************************** | 80%********************************* | 81%********************************* | 82%********************************** | 83%********************************** | 84%********************************** | 85%*********************************** | 86%*********************************** | 87%************************************ | 88%************************************ | 89%************************************ | 90%************************************* | 91%************************************* | 92%************************************** | 93%************************************** | 94%************************************** | 95%*************************************** | 96%*************************************** | 97%****************************************| 98%****************************************| 99%****************************************| 100%

  Waiting for remaining nodes to finish...

Elapsed time: 0.000705 sec


Stage 3: Gather best scores
---------------------------

0: local_Count=1 score=32286916 local_BufferSize=32
[ci-203-97b45286:02642] *** Process received signal ***
[ci-203-97b45286:02642] Signal: Segmentation fault (11)
[ci-203-97b45286:02642] Signal code: Address not mapped (1)
[ci-203-97b45286:02642] Failing at address: 0xeabc4e74
[ci-203-97b45286:02642] *** End of error message ***
/tmp/autopkgtest-lxc.6k2utcwh/downtmp/build.a3p/src/debian/tests/run-unit-test: line 20: 2642 Segmentation fault mpialign dd rt
autopkgtest [04:02:32]: test run-unit-test

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