Source: pairtools Version: 0.3.0-3.2 Severity: serious Pairtools FTBFS with pysam related error. Looks like something is off.
dh_auto_clean I: pybuild base:240: python3.11 setup.py clean Traceback (most recent call last): File "/<<PKGBUILDDIR>>/setup.py", line 130, in <module> ext_modules=get_ext_modules(), ^^^^^^^^^^^^^^^^^ File "/<<PKGBUILDDIR>>/setup.py", line 81, in get_ext_modules extra_link_args=pysam.get_libraries(), ^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/pysam/__init__.py", line 100, in get_libraries return [os.path.join(dirname, x + so) for x in pysam_libs] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/pysam/__init__.py", line 100, in <listcomp> return [os.path.join(dirname, x + so) for x in pysam_libs] ~~^~~~ TypeError: can only concatenate str (not "NoneType") to str Thanks, Nilesh -- System Information: Debian Release: bookworm/sid APT prefers testing APT policy: (990, 'testing') Architecture: amd64 (x86_64) Kernel: Linux 6.0.0-6-amd64 (SMP w/8 CPU threads; PREEMPT) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE not set Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled