Source: q2cli Version: 2022.11.1-2 Severity: serious Justification: FTBFS Tags: trixie sid ftbfs User: lu...@debian.org Usertags: ftbfs-20240115 ftbfs-trixie
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > debian/rules binary > dh binary --with python3 --buildsystem=pybuild > dh_update_autotools_config -O--buildsystem=pybuild > dh_autoreconf -O--buildsystem=pybuild > dh_auto_configure -O--buildsystem=pybuild > I: pybuild base:305: python3.11 setup.py config > running config > dh_auto_build -O--buildsystem=pybuild > I: pybuild base:305: /usr/bin/python3 setup.py build > running build > running build_py > creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli > copying q2cli/__init__.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli > copying q2cli/_version.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli > copying q2cli/__main__.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli > copying q2cli/commands.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli > copying q2cli/util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli > creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/tests > copying q2cli/tests/test_mystery_stew.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/tests > copying q2cli/tests/__init__.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/tests > copying q2cli/tests/test_cache_cli.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/tests > copying q2cli/tests/test_dev.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/tests > copying q2cli/tests/test_cli.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/tests > copying q2cli/tests/test_core.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/tests > copying q2cli/tests/test_usage.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/tests > copying q2cli/tests/test_tools.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/tests > creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/core > copying q2cli/core/__init__.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/core > copying q2cli/core/completion.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/core > copying q2cli/core/state.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/core > copying q2cli/core/usage.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/core > copying q2cli/core/config.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/core > copying q2cli/core/cache.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/core > creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/builtin > copying q2cli/builtin/__init__.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/builtin > copying q2cli/builtin/tools.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/builtin > copying q2cli/builtin/dev.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/builtin > copying q2cli/builtin/info.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/builtin > creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/click > copying q2cli/click/type.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/click > copying q2cli/click/__init__.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/click > copying q2cli/click/parser.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/click > copying q2cli/click/command.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/click > copying q2cli/click/option.py -> > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/click > running egg_info > creating q2cli.egg-info > writing q2cli.egg-info/PKG-INFO > writing dependency_links to q2cli.egg-info/dependency_links.txt > writing entry points to q2cli.egg-info/entry_points.txt > writing top-level names to q2cli.egg-info/top_level.txt > writing manifest file 'q2cli.egg-info/SOURCES.txt' > reading manifest file 'q2cli.egg-info/SOURCES.txt' > reading manifest template 'MANIFEST.in' > adding license file 'LICENSE' > writing manifest file 'q2cli.egg-info/SOURCES.txt' > UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/_version.py > set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/q2cli/_version.py to > '2022.11.1' > running build_scripts > creating build > creating build/scripts-3.11 > copying bin/tab-qiime -> build/scripts-3.11 > changing mode of build/scripts-3.11/tab-qiime from 644 to 755 > dh_auto_test -O--buildsystem=pybuild > I: pybuild base:305: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build; > python3.11 -m pytest --ignore=q2cli/tests/test_usage.py > ============================= test session starts > ============================== > platform linux -- Python 3.11.7, pytest-7.4.4, pluggy-1.3.0 > rootdir: /<<PKGBUILDDIR>> > collected 0 items / 6 errors > > ==================================== ERRORS > ==================================== > _ ERROR collecting .pybuild/cpython3_3.11/build/q2cli/tests/test_cache_cli.py > __ > q2cli/tests/test_cache_cli.py:15: in <module> > from qiime2 import Artifact > /usr/lib/python3/dist-packages/qiime2/__init__.py:23: in <module> > __citations__ = tuple(Citations.load('citations.bib', package='qiime2')) > /usr/lib/python3/dist-packages/qiime2/core/cite.py:26: in load > parser = bp.bparser.BibTexParser() > E AttributeError: module 'bibtexparser' has no attribute 'bparser' > ____ ERROR collecting .pybuild/cpython3_3.11/build/q2cli/tests/test_cli.py > _____ > q2cli/tests/test_cli.py:18: in <module> > from qiime2 import Artifact, Visualization > /usr/lib/python3/dist-packages/qiime2/__init__.py:23: in <module> > __citations__ = tuple(Citations.load('citations.bib', package='qiime2')) > /usr/lib/python3/dist-packages/qiime2/core/cite.py:26: in load > parser = bp.bparser.BibTexParser() > E AttributeError: module 'bibtexparser' has no attribute 'bparser' > ____ ERROR collecting .pybuild/cpython3_3.11/build/q2cli/tests/test_core.py > ____ > q2cli/tests/test_core.py:16: in <module> > from qiime2 import Artifact > /usr/lib/python3/dist-packages/qiime2/__init__.py:23: in <module> > __citations__ = tuple(Citations.load('citations.bib', package='qiime2')) > /usr/lib/python3/dist-packages/qiime2/core/cite.py:26: in load > parser = bp.bparser.BibTexParser() > E AttributeError: module 'bibtexparser' has no attribute 'bparser' > ____ ERROR collecting .pybuild/cpython3_3.11/build/q2cli/tests/test_dev.py > _____ > q2cli/tests/test_dev.py:16: in <module> > from qiime2 import Artifact > /usr/lib/python3/dist-packages/qiime2/__init__.py:23: in <module> > __citations__ = tuple(Citations.load('citations.bib', package='qiime2')) > /usr/lib/python3/dist-packages/qiime2/core/cite.py:26: in load > parser = bp.bparser.BibTexParser() > E AttributeError: module 'bibtexparser' has no attribute 'bparser' > _ ERROR collecting > .pybuild/cpython3_3.11/build/q2cli/tests/test_mystery_stew.py _ > q2cli/tests/test_mystery_stew.py:13: in <module> > from q2cli.core.usage import CLIUsage > q2cli/core/usage.py:14: in <module> > import qiime2.sdk.usage as usage > /usr/lib/python3/dist-packages/qiime2/sdk/usage.py:43: in <module> > import qiime2 > /usr/lib/python3/dist-packages/qiime2/__init__.py:23: in <module> > __citations__ = tuple(Citations.load('citations.bib', package='qiime2')) > /usr/lib/python3/dist-packages/qiime2/core/cite.py:26: in load > parser = bp.bparser.BibTexParser() > E AttributeError: module 'bibtexparser' has no attribute 'bparser' > ___ ERROR collecting .pybuild/cpython3_3.11/build/q2cli/tests/test_tools.py > ____ > q2cli/tests/test_tools.py:16: in <module> > from qiime2 import Artifact > /usr/lib/python3/dist-packages/qiime2/__init__.py:23: in <module> > __citations__ = tuple(Citations.load('citations.bib', package='qiime2')) > /usr/lib/python3/dist-packages/qiime2/core/cite.py:26: in load > parser = bp.bparser.BibTexParser() > E AttributeError: module 'bibtexparser' has no attribute 'bparser' > =============================== warnings summary > =============================== > ../../../../../../usr/lib/python3/dist-packages/qiime2/core/cite.py:10 > /usr/lib/python3/dist-packages/qiime2/core/cite.py:10: DeprecationWarning: > pkg_resources is deprecated as an API. See > https://setuptools.pypa.io/en/latest/pkg_resources.html > import pkg_resources > > ../../../../../../usr/lib/python3/dist-packages/pkg_resources/__init__.py:2871 > /usr/lib/python3/dist-packages/pkg_resources/__init__.py:2871: > DeprecationWarning: Deprecated call to > `pkg_resources.declare_namespace('flufl')`. > Implementing implicit namespace packages (as specified in PEP 420) is > preferred to `pkg_resources.declare_namespace`. See > https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages > declare_namespace(pkg) > > -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html > =========================== short test summary info > ============================ > ERROR q2cli/tests/test_cache_cli.py - AttributeError: module 'bibtexparser' > h... > ERROR q2cli/tests/test_cli.py - AttributeError: module 'bibtexparser' has no > ... > ERROR q2cli/tests/test_core.py - AttributeError: module 'bibtexparser' has > no... > ERROR q2cli/tests/test_dev.py - AttributeError: module 'bibtexparser' has no > ... > ERROR q2cli/tests/test_mystery_stew.py - AttributeError: module > 'bibtexparser... > ERROR q2cli/tests/test_tools.py - AttributeError: module 'bibtexparser' has > n... > !!!!!!!!!!!!!!!!!!! Interrupted: 6 errors during collection > !!!!!!!!!!!!!!!!!!!! > ======================== 2 warnings, 6 errors in 1.06s > ========================= > E: pybuild pybuild:391: test: plugin distutils failed with: exit code=2: cd > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build; python3.11 -m pytest > --ignore=q2cli/tests/test_usage.py > dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.11 > returned exit code 13 The full build log is available from: http://qa-logs.debian.net/2024/01/15/q2cli_2022.11.1-2_unstable.log All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240115;users=lu...@debian.org or: https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240115&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.