Source: atlas-ecmwf
Version: 0.36.0-2
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20240420 ftbfs-trixie ftbfs-t64-arm64
Hi,
During a rebuild of all packages in sid, your package failed to build
on arm64.
Relevant part (hopefully):
> make[3]: Entering directory '/<<PKGBUILDDIR>>/debian/build'
> [ 45%] Generating Partitioner_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/grid/Partitioner.h -o
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f/Partitioner_c_binding.f90 -m
> atlas_Partitioner_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 45%] Building CXX object
> src/apps/CMakeFiles/atlas-grid-points.dir/atlas-grid-points.cc.o
> cd /<<PKGBUILDDIR>>/debian/build/src/apps && /usr/bin/c++
> -I/<<PKGBUILDDIR>>/src -I/<<PKGBUILDDIR>>/debian/build/src
> -I/<<PKGBUILDDIR>>/atlas_io/src -I/<<PKGBUILDDIR>>/debian/build/atlas_io/src
> -I/usr/include/aarch64-linux-gnu/eckit
> -I/usr/include/aarch64-linux-gnu/eckit/geometry
> -I/usr/include/aarch64-linux-gnu/eckit/linalg
> -I/usr/include/aarch64-linux-gnu/eckit/maths
> -I/usr/lib/aarch64-linux-gnu/openmpi/include
> -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi
> -I/usr/include/aarch64-linux-gnu/eckit/mpi
> -I/usr/include/aarch64-linux-gnu/eckit/option -isystem /usr/include/eigen3 -g
> -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -fstack-clash-protection -Wformat -Werror=format-security
> -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -O3
> -DNDEBUG -std=gnu++17 -fPIE -fopenmp -MD -MT
> src/apps/CMakeFiles/atlas-grid-points.dir/atlas-grid-points.cc.o -MF
> CMakeFiles/atlas-grid-points.dir/atlas-grid-points.cc.o.d -o
> CMakeFiles/atlas-grid-points.dir/atlas-grid-points.cc.o -c
> /<<PKGBUILDDIR>>/src/apps/atlas-grid-points.cc
> [ 45%] Generating State_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/field/State.h -o
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f/State_c_binding.f90 -m
> atlas_State_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 45%] Generating WriteLoadBalanceReport_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/mesh/actions/WriteLoadBalanceReport.h
> -o
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f/WriteLoadBalanceReport_c_binding.f90
> -m atlas_WriteLoadBalanceReport_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 45%] Generating atlas_mesh_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/mesh/detail/MeshIntf.h -o
> atlas_mesh_c_binding.f90 -m atlas_mesh_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 45%] Generating atlas_meshbuilder_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/mesh/detail/MeshBuilderIntf.h -o
> atlas_meshbuilder_c_binding.f90 -m atlas_meshbuilder_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 45%] Generating atlas_read_file_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/internals/atlas_read_file.h -o
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f/atlas_read_file_c_binding.f90 -m
> atlas_atlas_read_file_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 46%] Generating atlas_trace_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/runtime/atlas_trace.h -o
> atlas_trace_c_binding.f90 -m atlas_trace_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 46%] Generating distribution_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/grid/detail/distribution/DistributionImpl.h
> -o distribution_c_binding.f90 -m atlas_distribution_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 47%] Generating domain_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/domain/detail/Domain.h -o
> domain_c_binding.f90 -m atlas_domain_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 47%] [fypp] Preprocessor generating field/atlas_FieldSet_module.F90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/cmake -E env
> FCKIT_EVAL_ARGS_EXCLUDE="-D[[:space:]]?.*=([0-9])+L"
> /usr/./libexec/fckit-eval /usr/bin/python3 /usr/./libexec/fckit-fypp -l 132
> -p -n -I\ /<<PKGBUILDDIR>>/src/atlas_f\ -I\
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f\ -I\ /<<PKGBUILDDIR>>/src\ -I\
> /<<PKGBUILDDIR>>/debian/build/src\ -I\
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f\ -I\
> /<<PKGBUILDDIR>>/debian/build/module\ -I\ /<<PKGBUILDDIR>>/src\ -I\
> /<<PKGBUILDDIR>>/debian/build/src\ -I\ /usr/include/aarch64-linux-gnu\ -I\
> /usr/include/aarch64-linux-gnu/eckit\ -I\ /usr/include/aarch64-linux-gnu\ -I\
> /usr/include/aarch64-linux-gnu/eckit/geometry\ -I\
> /usr/include/aarch64-linux-gnu\ -I\
> /usr/include/aarch64-linux-gnu/eckit/linalg\ -I\
> /usr/include/aarch64-linux-gnu\ -I\
> /usr/include/aarch64-linux-gnu/eckit/maths\ -I\ /usr/include/eigen3\ -I\
> /usr/lib/aarch64-linux-gnu/openmpi/include\ -I\
> /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi\ -I\
> /usr/include/aarch64-linux-gnu\ -I\ /usr/include/aarch64-linux-gnu/eckit/mpi\
> -I\ /usr/include/aarch64-linux-gnu\ -I\
> /usr/include/aarch64-linux-gnu/eckit/option\ -I\
> /<<PKGBUILDDIR>>/atlas_io/src\ -I\
> /<<PKGBUILDDIR>>/debian/build/atlas_io/src\ -I\ /usr/include/eigen3\ -I\
> /usr/include/aarch64-linux-gnu\ -I\
> /usr/lib/aarch64-linux-gnu/fortran/gfortran-mod-15/fckit\ -I\
> /usr/include/aarch64-linux-gnu\ -I\ /usr/include/aarch64-linux-gnu/fckit -I\
> /<<PKGBUILDDIR>>/src\ -I\ /<<PKGBUILDDIR>>/debian/build/src\ -I\
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f\ -I\
> /<<PKGBUILDDIR>>/debian/build/module\ -I\ /usr/include/aarch64-linux-gnu\ -I\
> /usr/lib/aarch64-linux-gnu/fortran/gfortran-mod-15/fckit\ -I\
> /usr/include/aarch64-linux-gnu\ -I\ /usr/include/aarch64-linux-gnu/fckit
> /<<PKGBUILDDIR>>/src/atlas_f/field/atlas_FieldSet_module.fypp
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f/field/atlas_FieldSet_module.F90
> No such file or directory
> make[3]: *** [src/atlas_f/CMakeFiles/atlas_ecmwf_f.dir/build.make:307:
> src/atlas_f/field/atlas_FieldSet_module.F90] Error 1
The full build log is available from:
http://qa-logs.debian.net/2024/04/20/atlas-ecmwf_0.36.0-2_unstable-arm64.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240420;users=lu...@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240420&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
