Package: src:bart-cuda Version: 0.6.00-1 Severity: serious Tags: ftbfs patch Control: fixed -1 0.8.00-2 Control: owner -1 sanv...@debian.org
Dear maintainer: During a rebuild of all packages in bullseye, your package failed to build: -------------------------------------------------------------------------------- [...] debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j2 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<<PKGBUILDDIR>>' make MAKESTAGE=2 make[2]: Entering directory '/<<PKGBUILDDIR>>' make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. gcc -Wdate-time -D_FORTIFY_SOURCE=2 -MMD -MF /<<PKGBUILDDIR>>/src/.bart.d -iquote /<<PKGBUILDDIR>>/src/ -DUSE_CUDA -I/usr//include -I/usr//include/ -I/usr//include -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, conv, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, estdelay, estdims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, homodyne, index, invert, itsense, join, looklocker, lrmatrix, mandelbrot, mip, moba, nlinv, noise, normalize, nrmse, nufft, ones, pattern, phantom, pics, pocsense, poisson, poly, repmat, reshape, resize, rmfreq, rof, rss, rtnlinv, sake, saxpy, scale, sdot, show, slice, spow, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu11 -fopenmp -c -o /<<PKGBUILDDIR>>/src/bart.o /<<PKGBUILDDIR>>/src/bart.c gcc -Wdate-time -D_FORTIFY_SOURCE=2 -MMD -MF src/.show.d -iquote /<<PKGBUILDDIR>>/src/ -DUSE_CUDA -I/usr//include -I/usr//include/ -I/usr//include -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, conv, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, estdelay, estdims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, homodyne, index, invert, itsense, join, looklocker, lrmatrix, mandelbrot, mip, moba, nlinv, noise, normalize, nrmse, nufft, ones, pattern, phantom, pics, pocsense, poisson, poly, repmat, reshape, resize, rmfreq, rof, rss, rtnlinv, sake, saxpy, scale, sdot, show, slice, spow, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu11 -fopenmp -c -o src/show.o src/show.c ./ar_lock.sh rsU lib/libbox.a src/show.o ar: creating lib/libbox.a gcc -Wdate-time -D_FORTIFY_SOURCE=2 -MMD -MF src/.slice.d -iquote /<<PKGBUILDDIR>>/src/ -DUSE_CUDA -I/usr//include -I/usr//include/ -I/usr//include -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, conv, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, estdelay, estdims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, homodyne, index, invert, itsense, join, looklocker, lrmatrix, mandelbrot, mip, moba, nlinv, noise, normalize, nrmse, nufft, ones, pattern, phantom, pics, pocsense, poisson, poly, repmat, reshape, resize, rmfreq, rof, rss, rtnlinv, sake, saxpy, scale, sdot, show, slice, spow, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu11 -fopenmp -c -o src/slice.o src/slice.c ./ar_lock.sh rsU lib/libbox.a src/slice.o [...] gcc -Wl,-z,relro -Wl,-z,now -rdynamic -rdynamic -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu11 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -MMD -MF ./.test_prox.d -iquote /<<PKGBUILDDIR>>/src/ -DUSE_CUDA -I/usr//include -I/usr//include/ -I/usr//include -DFFTWTHREADS -DUTESTS="call_test_thresh, call_test_auto_norm," -o test_prox utests/utest.c utests/test_prox.o lib/libiter.a lib/liblinops.a lib/libnum.a lib/libmisc.a lib/libnum.a lib/libmisc.a -L/usr//lib -lfftw3f -lfftw3f_threads -L/usr//lib -lcufft -lcudart -lcublas -lstdc++ -Wl,-rpath /usr//lib -L/usr//lib -llapacke -lblas -lm ./test_linop_matrix ./test_linop_matrix: 4/ 4 passed. ./test_linop ./test_linop: 3/ 3 passed. ./test_batchsvd ./test_batchsvd: 2/ 2 passed. ./test_pattern ./test_pattern: 1/ 1 passed. ./test_types ./test_types: 2/ 2 passed. ./test_misc ./test_misc: 2/ 2 passed. ./test_moba ./test_moba: 1/ 1 passed. ./test_nlop ./test_nlop: 15/15 passed. ./test_nufft [31mERROR: ./test_nufft: 7/ 8 passed. [0mmake[3]: *** [Makefile:685: utests-all] Error 1 make[3]: Leaving directory '/<<PKGBUILDDIR>>' make[2]: *** [Makefile:273: utest] Error 2 make[2]: Leaving directory '/<<PKGBUILDDIR>>' make[1]: *** [debian/rules:27: override_dh_auto_test] Error 2 make[1]: Leaving directory '/<<PKGBUILDDIR>>' make: *** [debian/rules:21: binary] Error 2 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 -------------------------------------------------------------------------------- This is essentially the same problem as #1026061, for which we already have a fix, so I'm filing this one mainly for completeness. Note this is not really random, but more like "almost never in some systems" and "almost always in some other systems". In fact, I'm getting a 100% failure rate on the following AWS machine types on which I tried: t3a-medium t3a-small t3a-large c6a-large m6a-large This suggests an issue with different floating point implementations between Intel and AMD, which would also explain why it only fails around 1% of the time for some people. [ Note: I will fix this via team upload, as I did with bart ]. Thanks.