Package: src:orange-spectroscopy Version: 0.8.1+git20250328-5 Severity: serious Tags: ftbfs forky sid
Dear maintainer: During a rebuild of all packages in unstable, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202603/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:orange-spectroscopy, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] debian/rules clean dh clean --with sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:142: Building wheel for python3.14 with "build" module I: pybuild base:384: python3.14 -m build --skip-dependency-check --no-isolation --wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_orange-spectroscopy * Building wheel... /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' [... snipped ...] .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owhyper.py::TestReadCoordinates::test_index_nan .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owhyper.py::TestOWHyper::test_strange .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owhyper.py::TestOWHyper::test_unknown_values_axes .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owhyper.py::TestReadCoordinates::test_index_nan .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owhyper.py::TestOWHyper::test_strange .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owhyper.py::TestOWHyper::test_unknown_values_axes /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/utils/__init__.py:68: RuntimeWarning: invalid value encountered in cast return np.round(positions).astype(int), np.isnan(positions) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owhyper.py: 6 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owhyper.py: 6 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/widgets/owhyper.py:652: RuntimeWarning: Mean of empty slice np.nanmean(col_df.iloc[i:i+bin_sz,j:j+bin_sz].to_numpy()) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py: 14 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpeakfit.py: 14 warnings /usr/lib/python3/dist-packages/lmfit/jsonutils.py:30: DeprecationWarning: Please import `gaussian` from the `scipy.signal.windows` namespace; the `scipy.signal.windows.windows` namespace is deprecated and will be removed in SciPy 2.0.0. t = getattr(module, oname, None) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py: 32 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpolar.py: 10 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpeakfit.py: 32 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpolar.py: 10 warnings /usr/lib/python3.13/multiprocessing/popen_fork.py:67: DeprecationWarning: This process (pid=2530) is multi-threaded, use of fork() may lead to deadlocks in the child. self.pid = os.fork() .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv /usr/lib/python3/dist-packages/asteval/asteval.py:922: RuntimeWarning: overflow encountered in exp out = func(*args, **keywords) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv /usr/lib/python3/dist-packages/asteval/astutils.py:263: RuntimeWarning: invalid value encountered in scalar subtract ast.Sub: lambda a, b: a - b, .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py: 15 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpeakfit.py: 15 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/widgets/peakfit_compute.py:30: DeprecationWarning: `trapz` is deprecated. Use `trapezoid` instead, or one of the numerical integration functions in `scipy.integrate`. output[col] = np.trapz(np.broadcast_to(comps[comp.prefix], x.shape), sorted_x) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpls.py: 22 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpls.py: 22 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/models/pls.py:49: UserWarning: _PLSCommonTransform should define __eq__ and __hash__ to be used for compute_shared super().__init__(transform) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpls.py: 22 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpls.py: 22 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/models/pls.py:85: UserWarning: PLSProjector should define __eq__ and __hash__ to be used for compute_value or set InheritEq = True if inherited methods suffice return ContinuousVariable(name, compute_value=PLSProjector(transformer, i)) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpls.py: 20 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpls.py: 20 warnings /usr/lib/python3/dist-packages/orangewidget/gui.py:2070: UserWarning: decorate OWPLS.apply with @gui.deferred and then explicitly call apply.now or apply.deferred. warnings.warn( .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpolar.py: 13 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpolar.py: 13 warnings /usr/lib/python3/dist-packages/orangewidget/utils/listview.py:119: DeprecationWarning: ListViewSearch is deprecated and will be removed in upcoming releases. Use ListViewFilter instead. warnings.warn(("ListViewSearch is deprecated and will be removed " + "in upcoming releases. Use ListViewFilter instead."), .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py: 6 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 11 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py: 6 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 11 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52: UserWarning: _PCAReconstructCommon should define __eq__ and __hash__ to be used for compute_shared super().__init__(commonfn) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py: 7 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 10 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py: 7 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 10 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52: UserWarning: _ShiftAndScaleCommon should define __eq__ and __hash__ to be used for compute_shared super().__init__(commonfn) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py: 6 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 6 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py: 6 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 6 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52: UserWarning: _MNFCommon should define __eq__ and __hash__ to be used for compute_shared super().__init__(commonfn) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py: 7 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py: 18 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py: 7 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_xas.py: 18 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52: UserWarning: _XASnormalizationCommon should define __eq__ and __hash__ to be used for compute_shared super().__init__(commonfn) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py: 4 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py: 11 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py: 4 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_xas.py: 11 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52: UserWarning: _ExtractEXAFSCommon should define __eq__ and __hash__ to be used for compute_shared super().__init__(commonfn) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestPCADenoising::test_no_samples .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestMNFDenoising::test_no_samples .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestPCADenoising::test_no_samples .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestMNFDenoising::test_no_samples /usr/lib/python3/dist-packages/Orange/data/table.py:219: UserWarning: <class 'numpy.ndarray'> must return a column, not 2d array warnings.warn(err) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/widgets/preprocessors/atm_corr.py:108: RuntimeWarning: All-NaN slice encountered self.preview_data_max = np.nanmax(spectra_mean(data.X)) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owsnr.py::TestOWSNR::test_zero_size_data .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owsnr.py::TestOWSNR::test_zero_size_data /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/widgets/owsnr.py:102: RuntimeWarning: divide by zero encountered in divide (bottleneck.nanmean(array, axis=0) / .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owsnr.py::TestOWSNR::test_zero_size_data .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owsnr.py::TestOWSNR::test_zero_size_data /usr/lib/python3/dist-packages/Orange/data/table.py:2472: RuntimeWarning: Array contains infinity. warnings.warn("Array contains infinity.", RuntimeWarning) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owspectralseries.py: 15 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owspectralseries.py: 15 warnings /usr/lib/python3/dist-packages/Orange/widgets/gui.py:483: DeprecationWarning: Argument 'valueType' is deprecated and ignored warnings.warn("Argument 'valueType' is deprecated and ignored", .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 42 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 42 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52: UserWarning: _SpSubtractCommon should define __eq__ and __hash__ to be used for compute_shared super().__init__(commonfn) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 5 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 5 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:97: RuntimeWarning: divide by zero encountered in divide transd = data.X / ref_X .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestTransmittance::test_no_infs .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestTransmittance::test_no_infs /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:97: RuntimeWarning: invalid value encountered in divide transd = data.X / ref_X .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 5 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 5 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:33: RuntimeWarning: divide by zero encountered in log10 np.log10(absd, absd) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestAbsorbance::test_no_infs .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestAbsorbance::test_no_infs /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:38: RuntimeWarning: divide by zero encountered in log10 absd = np.log10(data.X) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 6 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 6 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:32: RuntimeWarning: divide by zero encountered in divide absd = ref_X / data.X .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestAbsorbance::test_no_infs .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestAbsorbance::test_no_infs /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:32: RuntimeWarning: invalid value encountered in divide absd = ref_X / data.X .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 11 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_editor_baseline.py: 1 warning .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 11 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52: UserWarning: _RubberbandBaselineCommon should define __eq__ and __hash__ to be used for compute_shared super().__init__(commonfn) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestNormalize::test_no_infs .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestNormalize::test_no_infs /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:409: RuntimeWarning: invalid value encountered in divide data.X /= norm_data.X .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestNormalize::test_no_infs .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestNormalize::test_no_infs /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:427: RuntimeWarning: invalid value encountered in divide data.X = data.X / (max - min) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 5 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 5 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:469: RuntimeWarning: divide by zero encountered in divide return replace_infs(data.X / ref_X) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 42 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 42 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52: UserWarning: _NormalizePhaseReferenceCommon should define __eq__ and __hash__ to be used for compute_shared super().__init__(commonfn) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestNormalizeReference::test_no_infs .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestNormalizeReference::test_no_infs /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:469: RuntimeWarning: invalid value encountered in divide return replace_infs(data.X / ref_X) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_readers.py::TestOmnicMapReader::test_read .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_readers.py::TestOmnicMapReader::test_read /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/utils/pymca5/OmnicMap.py:148: RuntimeWarning: invalid value encountered in scalar divide deltaY = (yPositions[-1] - yPositions[0]) / (self.__nFiles - 1) .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_tile_reader.py: 6 warnings .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_tile_reader.py: 6 warnings /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/widgets/owtilefile.py:121: DeprecationWarning: 'addSpace' has been deprecated. Use gui.separator instead. vbox = gui.radioButtons(None, self, "source", box=True, addSpace=True, .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py::TestXASnormalization::test_no_infs .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py::TestXASnormalization::test_no_infs .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_xas.py::TestXASnormalization::test_no_infs .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_xas.py::TestXASnormalization::test_no_infs /usr/lib/python3/dist-packages/extranormal3/normal_xas.py:83: RuntimeWarning: invalid value encountered in divide return numpy.array((spectrum[1]-preedge_fitcurve[1]-flattening)/norm_const), norm_const .pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py::TestExtractEXAFS::test_file .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_xas.py::TestExtractEXAFS::test_file /usr/lib/python3/dist-packages/extranormal3/extra_exafs.py:96: RuntimeWarning: divide by zero encountered in divide sigma=1./k_interp**kweight .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_irfft.py::TestIRFFT::test_agilent_fft_ab /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_irfft.py:97: RuntimeWarning: invalid value encountered in log10 ab = np.log10(rsc / ssc) .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_irfft.py::TestIRFFT::test_multi_ab /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_irfft.py:134: RuntimeWarning: invalid value encountered in log10 ab = np.log10(rsc / ssc) .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owalignstack.py::test_image /usr/lib/python3/dist-packages/_pytest/python.py:170: PytestReturnNotNoneWarning: Test functions should return None, but .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owalignstack.py::test_image returned <class 'numpy.ndarray'>. Did you mean to use `assert` instead of `return`? See https://docs.pytest.org/en/stable/how-to/assert.html#return-not-none for more information. warnings.warn( .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owfft.py::TestOWFFT::test_calculation /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owfft.py:111: RuntimeWarning: invalid value encountered in log10 calc_abs = np.log10(rsc.X / ssc.X) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ SUBFAILED[data with just nans] orangecontrib/spectroscopy/tests/test_owalignstack.py::TestOWStackAlign::test_zero_size_data - Exception: All variables in the domain should have unique names. SUBFAILED[data with just nans] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: Not setting range to [nan, nan] SUBFAILED[data without rows] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation minimum which has no identity SUBFAILED[data with just class] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data with just continouos outcome] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data with just metas] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[with without attributes, class or metas] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data with just nans] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: Not setting range to [nan, nan] SUBFAILED[data without rows] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation minimum which has no identity SUBFAILED[data with just class] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data with just continouos outcome] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data with just metas] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[with without attributes, class or metas] orangecontrib/spectroscopy/tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data without rows] orangecontrib/spectroscopy/tests/test_owfft.py::TestOWFFT::test_zero_size_data - IndexError: index 0 is out of bounds for axis 0 with size 0 SUBFAILED[data with just class] orangecontrib/spectroscopy/tests/test_owfft.py::TestOWFFT::test_zero_size_data - ValueError: attempt to get argmax of an empty sequence SUBFAILED[data with just continouos outcome] orangecontrib/spectroscopy/tests/test_owfft.py::TestOWFFT::test_zero_size_data - ValueError: attempt to get argmax of an empty sequence SUBFAILED[data with just metas] orangecontrib/spectroscopy/tests/test_owfft.py::TestOWFFT::test_zero_size_data - ValueError: attempt to get argmax of an empty sequence SUBFAILED[with without attributes, class or metas] orangecontrib/spectroscopy/tests/test_owfft.py::TestOWFFT::test_zero_size_data - ValueError: attempt to get argmax of an empty sequence SUBFAILED[data with just nans] tests/test_owalignstack.py::TestOWStackAlign::test_zero_size_data - Exception: All variables in the domain should have unique names. SUBFAILED[data with just nans] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: Not setting range to [nan, nan] SUBFAILED[data without rows] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation minimum which has no identity SUBFAILED[data with just class] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data with just continouos outcome] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data with just metas] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[with without attributes, class or metas] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data with just nans] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: Not setting range to [nan, nan] SUBFAILED[data without rows] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation minimum which has no identity SUBFAILED[data with just class] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data with just continouos outcome] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data with just metas] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[with without attributes, class or metas] tests/test_owcos.py::TestOWCOS::test_zero_size_data - ValueError: zero-size array to reduction operation fmin which has no identity SUBFAILED[data without rows] tests/test_owfft.py::TestOWFFT::test_zero_size_data - IndexError: index 0 is out of bounds for axis 0 with size 0 SUBFAILED[data with just class] tests/test_owfft.py::TestOWFFT::test_zero_size_data - ValueError: attempt to get argmax of an empty sequence SUBFAILED[data with just continouos outcome] tests/test_owfft.py::TestOWFFT::test_zero_size_data - ValueError: attempt to get argmax of an empty sequence SUBFAILED[data with just metas] tests/test_owfft.py::TestOWFFT::test_zero_size_data - ValueError: attempt to get argmax of an empty sequence SUBFAILED[with without attributes, class or metas] tests/test_owfft.py::TestOWFFT::test_zero_size_data - ValueError: attempt to get argmax of an empty sequence = 36 failed, 1622 passed, 406 skipped, 192 deselected, 2772 warnings, 2486 subtests passed in 160.29s (0:02:40) = Widgets left: 0 Max widgets: 9089 E: pybuild pybuild:483: test: plugin pyproject failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build; python3.13 -m pytest --verbosity=2 -k "not Mixin" dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.14 3.13" returned exit code 13 make: *** [debian/rules:7: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2 --------------------------------------------------------------------------------
