Source: scikit-learn
Version: 0.5-1
Severity: serious
Justification: fails to build from source
scikit-learn failed to build from source in a clean sid+experimental
chroot. The interesting parts of the build log:
| Package versions: [...] libsvm-dev_3.0-1 libsvm3_3.0-1 [...]
[...]
| running build_ext
| customize UnixCCompiler
| customize UnixCCompiler using build_ext
| customize UnixCCompiler
| customize UnixCCompiler using build_ext
| building 'scikits.learn.svm._libsvm' extension
| compiling C sources
| C compiler: gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall
-Wstrict-prototypes -g -O2 -fPIC
|
| creating build/temp.linux-i686-2.5/scikits/learn/svm/src/libsvm
| compile options: '-I/usr/lib/pymodules/python2.5/numpy/core/include
-I/usr/include/libsvm-2.0/libsvm
-I/usr/lib/pymodules/python2.5/numpy/core/include -I/usr/include/python2.5 -c'
| gcc: scikits/learn/svm/src/libsvm/_libsvm.c
| scikits/learn/svm/src/libsvm/_libsvm.c:160:17: error: svm.h: No such file or
directory
| In file included from scikits/learn/svm/src/libsvm/_libsvm.c:161:
| scikits/learn/svm/src/libsvm/libsvm_helper.c:19: error: field 'param' has
incomplete type
| scikits/learn/svm/src/libsvm/libsvm_helper.c: In function 'dense_to_sparse':
| scikits/learn/svm/src/libsvm/libsvm_helper.c:66: error: invalid application of 'sizeof' to incomplete type 'struct svm_node'
| scikits/learn/svm/src/libsvm/libsvm_helper.c:75: error: dereferencing pointer to incomplete type
| scikits/learn/svm/src/libsvm/libsvm_helper.c:76: error: dereferencing pointer
to incomplete type
| scikits/learn/svm/src/libsvm/libsvm_helper.c:77: error: increment of pointer
to unknown structure
| scikits/learn/svm/src/libsvm/libsvm_helper.c:77: error: arithmetic on pointer
to an incomplete type
| scikits/learn/svm/src/libsvm/libsvm_helper.c:83: error: dereferencing pointer
to incomplete type
| scikits/learn/svm/src/libsvm/libsvm_helper.c:84: error: increment of pointer
to unknown structure
| scikits/learn/svm/src/libsvm/libsvm_helper.c:84: error: arithmetic on pointer
to an incomplete type
| scikits/learn/svm/src/libsvm/libsvm_helper.c:87: error: arithmetic on pointer
to an incomplete type
| scikits/learn/svm/src/libsvm/libsvm_helper.c:87: error: arithmetic on pointer
to an incomplete type
| scikits/learn/svm/src/libsvm/libsvm_helper.c:88: error: invalid application of 'sizeof' to incomplete type 'struct svm_node'
| scikits/learn/svm/src/libsvm/libsvm_helper.c:90: error: invalid application of 'sizeof' to incomplete type 'struct svm_node'
[...and so on]
| dh_auto_build: python2.5 setup.py build returned exit code 1
| make: *** [build] Error 1
--
Jakub Wilk
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