Package: bwa Version: 0.6.0-1 Severity: serious Justification: fails to build from source
Unfortunately, bwa version 0.6.0 seems to include a header that is specific to amd64. For instance: bwtmisc.c:172:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] bwtmisc.c: In function 'bwt_pac2bwt': bwtmisc.c:72:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] bwtmisc.c: In function 'bwa_seq_len': bwtmisc.c:51:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] gcc -c -Wall -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DHAVE_PTHREAD bwtindex.c -o bwtindex.o gcc -c -Wall -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DHAVE_PTHREAD ksw.c -o ksw.o ksw.c:28:23: fatal error: emmintrin.h: No such file or directory compilation terminated. make[2]: *** [ksw.o] Error 1 make[2]: Leaving directory `/build/buildd-bwa_0.6.0-1-armel-HDdcYb/bwa-0.6.0' dh_auto_build: make -j1 CFLAGS=-Wall -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FORTIFY_SOURCE=2 -Wl,-z,relro returned exit code 2 make[1]: *** [override_dh_auto_build] Error 2 make[1]: Leaving directory `/build/buildd-bwa_0.6.0-1-armel-HDdcYb/bwa-0.6.0' make: *** [build] Error 2 -- Charles -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
