Your message dated Mon, 07 Jun 2010 17:18:06 +0000
with message-id <e1olfxe-0000tr...@ries.debian.org>
and subject line Bug#583018: fixed in pymvpa 0.4.5~dev23-1
has caused the Debian Bug report #583018,
regarding pymvpa: FTBFS: svmc_wrap.cpp:2891: error: 'svm_print_string' was not
declared in this scope
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
583018: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=583018
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: pymvpa
Version: 0.4.4-1
Severity: serious
Tags: squeeze sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20100524 qa-ftbfs
Justification: FTBFS on amd64
Hi,
During a rebuild of all packages in sid, your package failed to build on
amd64.
Relevant part:
> gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -O2 -g -Wall -O2
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/./build/temp.linux-x86_64-2.5/mvpa/clfs/libsmlrc/smlr.o
> -lm -o
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/./build/lib.linux-x86_64-2.5/mvpa/clfs/libsmlrc/smlrc.so
> building 'mvpa.clfs.libsvmc._svmc' extension
> compiling C++ sources
> C compiler: g++ -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall
> -g -O2 -g -Wall -O2 -fPIC
>
> creating
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/temp.linux-x86_64-2.5/build
> creating
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/temp.linux-x86_64-2.5/build/user-pymvpa_0.4.4-1-amd64-PpEO5E
> creating
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/temp.linux-x86_64-2.5/build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4
> creating
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/temp.linux-x86_64-2.5/build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build
> creating
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/temp.linux-x86_64-2.5/build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5
> creating
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/temp.linux-x86_64-2.5/build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa
> creating
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/temp.linux-x86_64-2.5/build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa/clfs
> creating
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/temp.linux-x86_64-2.5/build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa/clfs/libsvmc
> compile options: '-I/usr/include/numpy -I/usr/include/libsvm-2.0/libsvm
> -I/usr/include/libsvm -I/usr/local/include/libsvm
> -I/usr/local/include/libsvm-2.0/libsvm -I/usr/local/include
> -I/usr/lib/python2.5/site-packages/numpy/core/include
> -I/usr/include/python2.5 -c'
> g++:
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:
> In function 'void svm_set_verbosity(int)':
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2891:
> error: 'svm_print_string' was not declared in this scope
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2893:
> error: 'svm_print_string' was not declared in this scope
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:
> In function 'void svm_set_verbosity(int)':
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2891:
> error: 'svm_print_string' was not declared in this scope
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2893:
> error: 'svm_print_string' was not declared in this scope
> error: Command "g++ -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2
> -Wall -g -O2 -g -Wall -O2 -fPIC -I/usr/include/numpy
> -I/usr/include/libsvm-2.0/libsvm -I/usr/include/libsvm
> -I/usr/local/include/libsvm -I/usr/local/include/libsvm-2.0/libsvm
> -I/usr/local/include -I/usr/lib/python2.5/site-packages/numpy/core/include
> -I/usr/include/python2.5 -c
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp
> -o
> /build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/./build/temp.linux-x86_64-2.5/build/user-pymvpa_0.4.4-1-amd64-PpEO5E/pymvpa-0.4.4/build/src.linux-x86_64-2.5/mvpa/clfs/libsvmc/svmc_wrap.o"
> failed with exit status 1
> make: *** [debian/python-module-stampdir/python-mvpa-lib] Error 1
The full build log is available from:
http://people.debian.org/~lucas/logs/2010/05/24/pymvpa_0.4.4-1_lsid64.buildlog
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot. Internet was not
accessible from the build systems.
--
| Lucas Nussbaum
| lu...@lucas-nussbaum.net http://www.lucas-nussbaum.net/ |
| jabber: lu...@nussbaum.fr GPG: 1024D/023B3F4F |
--- End Message ---
--- Begin Message ---
Source: pymvpa
Source-Version: 0.4.5~dev23-1
We believe that the bug you reported is fixed in the latest version of
pymvpa, which is due to be installed in the Debian FTP archive:
pymvpa_0.4.5~dev23-1.diff.gz
to main/p/pymvpa/pymvpa_0.4.5~dev23-1.diff.gz
pymvpa_0.4.5~dev23-1.dsc
to main/p/pymvpa/pymvpa_0.4.5~dev23-1.dsc
pymvpa_0.4.5~dev23.orig.tar.gz
to main/p/pymvpa/pymvpa_0.4.5~dev23.orig.tar.gz
python-mvpa-doc_0.4.5~dev23-1_all.deb
to main/p/pymvpa/python-mvpa-doc_0.4.5~dev23-1_all.deb
python-mvpa-lib_0.4.5~dev23-1_amd64.deb
to main/p/pymvpa/python-mvpa-lib_0.4.5~dev23-1_amd64.deb
python-mvpa_0.4.5~dev23-1_all.deb
to main/p/pymvpa/python-mvpa_0.4.5~dev23-1_all.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 583...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Yaroslav Halchenko <deb...@onerussian.com> (supplier of updated pymvpa package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Mon, 07 Jun 2010 12:08:57 -0400
Source: pymvpa
Binary: python-mvpa python-mvpa-doc python-mvpa-lib
Architecture: source all amd64
Version: 0.4.5~dev23-1
Distribution: unstable
Urgency: low
Maintainer: NeuroDebian Team <t...@neuro.debian.net>
Changed-By: Yaroslav Halchenko <deb...@onerussian.com>
Description:
python-mvpa - multivariate pattern analysis with Python
python-mvpa-doc - documentation and examples for PyMVPA
python-mvpa-lib - low-level implementations and bindings for PyMVPA
Closes: 583018
Changes:
pymvpa (0.4.5~dev23-1) unstable; urgency=low
.
* New upstream pre-release snapshot. Includes few enhancements
and fixes:
- Compatible with libsvm >= 2.91 (Closes: #583018)
- No string exceptions raised
- Setting of shrinking parameter in sg.svm interface
- Deducing number of SVs for SVR (libsvm)
- Correction of significance in the tails of non-parametric
tests
* debian/control
- Moving under umbrella of NeuroDebian Team
Checksums-Sha1:
d29bb258dd6d66f7918b588ffa7c2f5cdcd77c61 1629 pymvpa_0.4.5~dev23-1.dsc
3de2a079c1bc75d3714a22ff8bf9e8119310d24f 4148517 pymvpa_0.4.5~dev23.orig.tar.gz
171c2417b8e93c63e7367c2e6058f33c4d98cea4 6564 pymvpa_0.4.5~dev23-1.diff.gz
7c3049b6d88ab5fdf21ffcabc71a8784c855b5cf 2164418
python-mvpa_0.4.5~dev23-1_all.deb
5c59fd4623358150de8214b3fc1a2d74cd1ba1ca 9055564
python-mvpa-doc_0.4.5~dev23-1_all.deb
d22cdd5ff30232b9ace9b714f95289d1ae71e6c6 68366
python-mvpa-lib_0.4.5~dev23-1_amd64.deb
Checksums-Sha256:
63bf3a16da5de39df0d423287bf8139f3aa74190f55924c6a1e2d91fffa9d402 1629
pymvpa_0.4.5~dev23-1.dsc
1cdcfff6803791f2652eafa36e5f7c04c8ae5c8307c3d076097b21e8c377ccf2 4148517
pymvpa_0.4.5~dev23.orig.tar.gz
196e60dba32403bd755984277141bc5cbc8af5988d85db26a687423bbad908e1 6564
pymvpa_0.4.5~dev23-1.diff.gz
854d008fef4a29a02e2ee8ed35914af958d6fded965410fadd8bb9009eaa78ed 2164418
python-mvpa_0.4.5~dev23-1_all.deb
e0aefbd053071a4fb12ed39d213fc641d1ce220137a6e21f6058a63c8ca15554 9055564
python-mvpa-doc_0.4.5~dev23-1_all.deb
972cc35bbd7ec0e32b560e0dd93a9600549e80933636bc9cba78e574af11dc95 68366
python-mvpa-lib_0.4.5~dev23-1_amd64.deb
Files:
68228f06512ba2495274c56fd48f64d0 1629 python optional pymvpa_0.4.5~dev23-1.dsc
7119e74f1fc095f5312e4afc4eb7a817 4148517 python optional
pymvpa_0.4.5~dev23.orig.tar.gz
66ff568103c43c0d3fe186548c1e0e7c 6564 python optional
pymvpa_0.4.5~dev23-1.diff.gz
54a76e471d520aaf753f150d1153f668 2164418 python optional
python-mvpa_0.4.5~dev23-1_all.deb
9bd852188253919b6ea34caf66294ca7 9055564 doc optional
python-mvpa-doc_0.4.5~dev23-1_all.deb
976cc83d462fc66cd3594181706d1f8c 68366 python optional
python-mvpa-lib_0.4.5~dev23-1_amd64.deb
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.10 (GNU/Linux)
iEYEARECAAYFAkwNJQQACgkQjRFFY3XAJMiZEgCfRZmT8QF47ZFNqFydLI1LmV2T
VTsAoJeaakbKpzpCupYKSMgfyc03G8h/
=tYzG
-----END PGP SIGNATURE-----
--- End Message ---
