Your message dated Wed, 15 Aug 2012 09:17:42 +0000
with message-id <e1t1zjs-0005ne...@franck.debian.org>
and subject line Bug#682490: fixed in biomaj-watcher 1.2.0-9
has caused the Debian Bug report #682490,
regarding biomaj-watcher: modifies ownership/permissions of files from the 
biomaj package
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
682490: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=682490
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: biomaj-watcher
Version: 1.2.0-8
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package modifies files from
another package.

>From the attached log (scroll to the bottom...):

2m3.0s ERROR: FAIL: After purging files have been modified:
  /etc/biomaj/db_properties/     owned by: biomaj
  /etc/biomaj/db_properties/admin/       owned by: biomaj
  /etc/biomaj/db_properties/admin/alu.properties         owned by: biomaj
  /etc/biomaj/db_properties/admin/sts.properties         owned by: biomaj
  /etc/biomaj/db_properties/global.properties    owned by: biomaj
  /var/lib/biomaj/       owned by: biomaj
  /var/lib/biomaj/migration/     owned by: biomaj
  /var/lib/biomaj/migration/update.pl    owned by: biomaj
  /var/log/biomaj/       owned by: biomaj


The modifications done here are (in the postinst):

      chown -R tomcat6 /etc/biomaj/db_properties
      chown -R tomcat6 /usr/share/java/webapps/biomaj-watcher
      chmod -R 775 /etc/biomaj/db_properties
      chown -R tomcat6 /var/log/biomaj
      chmod -R 775 /var/log/biomaj
      chown -R tomcat6 /var/lib/biomaj
      chmod -R 775 /var/lib/biomaj
      chown -R tomcat6 /etc/biomaj-watcher
      chown -R tomcat6 /etc/biomaj-watcher

The permission changes (at least on the files) will be reverted whenever
the biomaj package is reinstalled or upgraded - if you really need
tomcat ownership and write permissions: use dpkg-statoverride.
If you don't need them, don't set them.

Setting the severity to serious because this has the potential to break
biomaj-watcher after an biomaj upgrade.


cheers,

Andreas

Attachment: biomaj-watcher_1.2.0-8.log.gz
Description: GNU Zip compressed data


--- End Message ---
--- Begin Message ---
Source: biomaj-watcher
Source-Version: 1.2.0-9

We believe that the bug you reported is fixed in the latest version of
biomaj-watcher, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 682...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Olivier Sallou <osal...@debian.org> (supplier of updated biomaj-watcher package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Sun, 24 Jun 2012 15:33:54 +0200
Source: biomaj-watcher
Binary: biomaj-watcher
Architecture: source all
Version: 1.2.0-9
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team 
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Olivier Sallou <osal...@debian.org>
Description: 
 biomaj-watcher - biological data-bank updater - web interface
Closes: 682490 683530
Changes: 
 biomaj-watcher (1.2.0-9) unstable; urgency=low
 .
   [ Olivier Sallou ]
   * modifies ownership/permissions of files from the biomaj package
     - debian/postinst, debian/setperms.sh, debian/unsetperms.sh,
       debian/install (Closes: #682490)
   * debian/control: Transition package to use default java implementation
     - Thanks to James Page (james.p...@ubuntu.com) (Closes: #683530)
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 50c5d3bdb5c6422acfb9a1b38deb70239a063815 38439 
biomaj-watcher_1.2.0-9.debian.tar.gz
 7784169cad1c81fb326e8542f5053563c9c3c678 34335648 
biomaj-watcher_1.2.0-9_all.deb
Checksums-Sha256: 
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biomaj-watcher_1.2.0-9.dsc
 c38fb16e9559011d9b344211e34b38013091027bb9d9585358d25f45b1c9028c 38439 
biomaj-watcher_1.2.0-9.debian.tar.gz
 68ba8391f6f993ef5ec241367874b57c612bd21953f609615c33ace01ba538aa 34335648 
biomaj-watcher_1.2.0-9_all.deb
Files: 
 af8b25eb0fecbc3ec2a974cf111ab6f8 2317 contrib/science optional 
biomaj-watcher_1.2.0-9.dsc
 060d952b74d308ef59fec28d0a51d0c4 38439 contrib/science optional 
biomaj-watcher_1.2.0-9.debian.tar.gz
 40ea4014c275adf3d3c3ca524a5ab1e3 34335648 contrib/science optional 
biomaj-watcher_1.2.0-9_all.deb

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