Your message dated Sat, 16 Feb 2013 09:48:04 +0000
with message-id <e1u6eni-00041h...@franck.debian.org>
and subject line Bug#700525: fixed in sundials 2.5.0-2
has caused the Debian Bug report #700525,
regarding sundials: several binary packages not linked properly against blas
and lapack
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
700525: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=700525
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: sundials
Version: 2.5.0-1
Severity: normal
even though lapack is in the build dependencies and is picked up by the
configure step it is not linked against the libraries that need it and
is thus also lacking a binary dependency:
ldd -r /usr/lib/libsundials_cvodes.so.2
linux-vdso.so.1 => (0x00007fff77dff000)
/usr/lib/libeatmydata/libeatmydata.so (0x00007f8a152e4000)
/usr/lib/cowdancer/libcowdancer.so (0x00007f8a150e0000)
libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007f8a14e5b000)
libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007f8a14ad1000)
libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007f8a148cd000)
/lib64/ld-linux-x86-64.so.2 (0x00007f8a1571c000)
undefined symbol: dcopy_ (/usr/lib/libsundials_cvodes.so.2)
undefined symbol: dscal_ (/usr/lib/libsundials_cvodes.so.2)
undefined symbol: dgbtrs_ (/usr/lib/libsundials_cvodes.so.2)
undefined symbol: dgbtrf_ (/usr/lib/libsundials_cvodes.so.2)
undefined symbol: dgetrf_ (/usr/lib/libsundials_cvodes.so.2)
undefined symbol: dgetrs_ (/usr/lib/libsundials_cvodes.so.2)
see also:
https://bugs.launchpad.net/ubuntu/+source/sundials/+bug/1124062
--- End Message ---
--- Begin Message ---
Source: sundials
Source-Version: 2.5.0-2
We believe that the bug you reported is fixed in the latest version of
sundials, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 700...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Christophe Trophime <christophe.troph...@lncmi.cnrs.fr> (supplier of updated
sundials package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Fri, 15 Feb 2013 11:40:09 +0100
Source: sundials
Binary: libsundials-serial libsundials-cvode1 libsundials-cvodes2
libsundials-ida2 libsundials-idas0 libsundials-kinsol1 libsundials-nvecserial0
libsundials-serial-dev octave-sundials
Architecture: source amd64
Version: 2.5.0-2
Distribution: unstable
Urgency: low
Maintainer: Debian Science Team
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Christophe Trophime <christophe.troph...@lncmi.cnrs.fr>
Description:
libsundials-cvode1 - ordinary differentialequation solver (SUNDIALS library)
libsundials-cvodes2 - ODE solver with sensistivity analysis (SUNDIALS library)
libsundials-ida2 - differential-algebraic system solver (SUNDIALS library)
libsundials-idas0 - IDA solver with sensitivity capabilities (SUNDIALS library)
libsundials-kinsol1 - KINSOL solver (SUNDIALS library)
libsundials-nvecserial0 - vector operations library (SUNDIALS library)
libsundials-serial - SUit of Nonlinear and DIfferential/ALgebraic equation
Solvers
libsundials-serial-dev - SUNDIALS development files
octave-sundials - SUNDIALS for octave
Closes: 700525
Changes:
sundials (2.5.0-2) unstable; urgency=low
.
* debian/rules:
- Add -lblas -llapack -lm to LDFLAGS (closes: #700525)
Checksums-Sha1:
7d6aa90c08a45ed2b451fd9f55a921f5c88937c9 1974 sundials_2.5.0-2.dsc
834865f4914b45687d7f15bfcf5a5020b012c735 64134 sundials_2.5.0-2.diff.gz
6965b58d1cc8e547190a9d4049ef4de185ad1f55 8310
libsundials-serial_2.5.0-2_amd64.deb
b175b8742219e8bdef2e228e875f877b6bd9634a 61494
libsundials-cvode1_2.5.0-2_amd64.deb
01d70f7963bc350edb5a8983948d2c3186d7094a 99842
libsundials-cvodes2_2.5.0-2_amd64.deb
2a3ac9495bb5af24f34b5ec2ad6a758b1413f759 58052
libsundials-ida2_2.5.0-2_amd64.deb
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libsundials-idas0_2.5.0-2_amd64.deb
5c639d736c89fdcc24e2f059ae58bed68ebf27ba 46856
libsundials-kinsol1_2.5.0-2_amd64.deb
40623b9b833290a65b66be198e3636c9b1cb488f 16132
libsundials-nvecserial0_2.5.0-2_amd64.deb
024df81853d8123a45ad3f4576b707f968eed560 943102
libsundials-serial-dev_2.5.0-2_amd64.deb
95eed34e26d47205b941b5bfccb9dc95c03a54a3 378160
octave-sundials_2.5.0-2_amd64.deb
Checksums-Sha256:
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sundials_2.5.0-2.dsc
067a209ac50ca3f6cc8e4c1058db839014fa3eee6c84ce3e6f8cb1deae8c8a16 64134
sundials_2.5.0-2.diff.gz
3e619f53af1cc673f25479884198cdcc3d5da6b2772e3f8442939542e8310d8e 8310
libsundials-serial_2.5.0-2_amd64.deb
e5d632d1b1d109489f2837b1d39bb44d0250e2022fca4e66bc7660608a126cbb 61494
libsundials-cvode1_2.5.0-2_amd64.deb
de64db7196cc4ef85147de15958b0910cfc2c3cb987153b1aef1f9956e14a975 99842
libsundials-cvodes2_2.5.0-2_amd64.deb
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libsundials-ida2_2.5.0-2_amd64.deb
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libsundials-idas0_2.5.0-2_amd64.deb
3730fe1463f66a2cc2eaa6f68c7b24a7b5f71f6bb7cdc4e9444410c148402ab2 46856
libsundials-kinsol1_2.5.0-2_amd64.deb
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libsundials-nvecserial0_2.5.0-2_amd64.deb
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libsundials-serial-dev_2.5.0-2_amd64.deb
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octave-sundials_2.5.0-2_amd64.deb
Files:
6d2ba4e49004b57a9a15787cc44510b6 1974 libs optional sundials_2.5.0-2.dsc
3c8464a3d58b991fec11f7ce22c508cf 64134 libs optional sundials_2.5.0-2.diff.gz
1454fda673be0e12c908127dce3d979d 8310 libs optional
libsundials-serial_2.5.0-2_amd64.deb
ab92c3cc03349782d2d56723dcbd335c 61494 libs optional
libsundials-cvode1_2.5.0-2_amd64.deb
85107f1a6b11850bfca1f7d6fd35ae06 99842 libs optional
libsundials-cvodes2_2.5.0-2_amd64.deb
7309b3e1e778f36182070bf113805920 58052 libs optional
libsundials-ida2_2.5.0-2_amd64.deb
8d704aef80f2a14dcf214f2100717471 96588 libs optional
libsundials-idas0_2.5.0-2_amd64.deb
bed647ac34ee9e6cdebb89120eb50439 46856 libs optional
libsundials-kinsol1_2.5.0-2_amd64.deb
364a6d2146fba90be33a7d20fc7dc45e 16132 libs optional
libsundials-nvecserial0_2.5.0-2_amd64.deb
66dff831f61c9f04cabcc7080753e894 943102 libdevel optional
libsundials-serial-dev_2.5.0-2_amd64.deb
5a87777391fd2a10d432c51a2a27009e 378160 libs optional
octave-sundials_2.5.0-2_amd64.deb
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--- End Message ---
