Your message dated Sun, 02 Mar 2014 09:20:48 +0000 with message-id <e1wk2zk-0000xw...@franck.debian.org> and subject line Bug#739575: fixed in python-pysam 0.7.5-3 has caused the Debian Bug report #739575, regarding python-pysam-tests: world writable directory tree: /var/lib/pysam/tests to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 739575: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=739575 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: python-pysam-tests Version: 0.7.5-1 Severity: serious User: debian...@lists.debian.org Usertags: piuparts Hi, during a test with piuparts I noticed your package ships a world writable directory and several world writable files in there. >From the attached log (scroll to the bottom...): ERROR: BAD PERMISSIONS drwxrwxrwx 3 root root 680 Feb 19 16:28 /var/lib/pysam/tests -rw-rw-rw- 1 root root 113194 Jan 3 2012 /var/lib/pysam/tests/ex1.sam.gz -rw-rw-rw- 1 root root 1787 Jan 3 2012 /var/lib/pysam/tests/ex10.sam -rw-rw-rw- 1 root root 840 Jan 3 2012 /var/lib/pysam/tests/ex3.sam -rw-rw-rw- 1 root root 460 Jan 3 2012 /var/lib/pysam/tests/ex4.sam -rw-rw-rw- 1 root root 277 Jan 3 2012 /var/lib/pysam/tests/ex5.sam -rw-rw-rw- 1 root root 332 Jan 3 2012 /var/lib/pysam/tests/ex6.sam -rw-rw-rw- 1 root root 311 Jan 3 2012 /var/lib/pysam/tests/ex7.sam -rw-rw-rw- 1 root root 516 Jan 3 2012 /var/lib/pysam/tests/ex8.sam -rw-rw-rw- 1 root root 10280 Jan 3 2012 /var/lib/pysam/tests/ex9_fail.bam -rw-rw-rw- 1 root root 10270 Jan 3 2012 /var/lib/pysam/tests/ex9_nofail.bam -rw-rw-rw- 1 root root 771 Feb 18 19:16 /var/lib/pysam/tests/example_btag.bam -rw-rw-rw- 1 root root 2933 Jan 14 2013 /var/lib/pysam/tests/example_btag.sam -rw-rw-rw- 1 root root 7554 Jan 14 2013 /var/lib/pysam/tests/example_empty_header.bam -rw-rw-rw- 1 root root 239 Nov 20 2012 /var/lib/pysam/tests/example_unmapped_reads_no_sq.sam -rw-rw-rw- 1 root root 368 Nov 20 2012 /var/lib/pysam/tests/example_user_header.sam -rw-rw-rw- 1 root root 4344 Nov 20 2012 /var/lib/pysam/tests/issue100.bam -rw-rw-rw- 1 root root 383 Jan 3 2012 /var/lib/pysam/tests/tag_bug.bam -rw-rw-rw- 1 root root 514 Jun 26 2013 /var/lib/pysam/tests/test_unaligned.bam Cheers, Andreas
python-pysam-tests_0.7.5-1.log.gz
Description: GNU Zip compressed data
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--- Begin Message ---Source: python-pysam Source-Version: 0.7.5-3 We believe that the bug you reported is fixed in the latest version of python-pysam, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 739...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated python-pysam package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Sat, 01 Mar 2014 23:40:21 +0100 Source: python-pysam Binary: python-pysam python-pysam-tests Architecture: source amd64 all Version: 0.7.5-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: python-pysam - interface for the SAM/BAM sequence alignment and mapping format python-pysam-tests - interface for the SAM/BAM sequence alignment and mapping format ( Closes: 739575 Changes: python-pysam (0.7.5-3) unstable; urgency=medium . * Do not install tests in world writable dir Closes: #739575 Checksums-Sha1: 1a982bc416d3d9a09cc6fad60f85f730348fc398 2146 python-pysam_0.7.5-3.dsc 860a182f79390dda162a39f6110a8f148942664a 18868 python-pysam_0.7.5-3.debian.tar.xz 6f2ee1f59ab70607271c91b247237d170f4c3d9b 588396 python-pysam_0.7.5-3_amd64.deb 878b408bf5629b4316916f932ae9dee857d821f2 578900 python-pysam-tests_0.7.5-3_all.deb Checksums-Sha256: b9d4781911a79ed1ec948f675fcf829e45f5662d62973566b75bd5be2fd21945 2146 python-pysam_0.7.5-3.dsc da057de1796a06c358ba76b7779cb90c8b35103faa2cf57cd9f53aaf8d323f1c 18868 python-pysam_0.7.5-3.debian.tar.xz 2f0b9d1c1bed00375931b11fc7b6915cbd5e52b3ee879616e6ecceb44e21158f 588396 python-pysam_0.7.5-3_amd64.deb 3e77121c61a4c438ecc958ccbd26ad7b6cdef700aed73c7461bf22d849c5f08e 578900 python-pysam-tests_0.7.5-3_all.deb Files: ea9496b69c457f11e96d346df5f14520 2146 python optional python-pysam_0.7.5-3.dsc 92ba3862f43e854fa6bb90ef1740537d 18868 python optional python-pysam_0.7.5-3.debian.tar.xz a98130ad35af64c5a6d9525994fa67a8 588396 python optional python-pysam_0.7.5-3_amd64.deb 994d49ed26bd5d36f76ae85599ee1852 578900 python extra python-pysam-tests_0.7.5-3_all.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJTEvEVAAoJEFeKBJTRxkbRkC4P/A8WkmWY9fiozdOOzrtV2BE6 kSHAn6kMERIOq/oJgASoqv/mgaPGSQOPYhrKXlKG4OaQHvaDwgTvvTpamoiXxJBR wcl2hpP65TzfaQ7trtoT+Gx9DphgfVIVZhvGK0jYAbQuc3nK7Q6yRHxRMfLDYOin gWqfbho0tX0kl2CcnliOvhTZMUdhR9hE8OnUSYSS9atFxdQ0tJPbiIV6wRtQBv9A B1CPY7qPG2Ux3C1P6oI8qMbAOLAgZ+LwtZmBXeyvhEZxt1v1Y3g0Oe7AKdYO5z+c H3XbsQe0QiRqGCu837A14rQ2Ia+GaOXjdoKQChBObYHw4hIVbreHfdgahxpxwzEQ rbK9P3vI0nCE8dKXtpQulfQgLJFJgloXpk+2NMoGZFQ62gCMtb48E4rfK6kFFhuV X3OSL5AK79yaJsuIgIQg9hUrrjhRgua1cqJiZG8GB3vZuiVUJzlEGcPIip3663LJ jA+OsmqcZ/ch28tZYuhRok+JVsvf4YFEgdON0h5lSp6hv8dl6Vm/bHsUbVrS3uJB RMgkc559ibk0mPxeBX2KczwwPkhNj3kuI2enuwP5pkcEfB8HzT4KUGd7VfBR4xgg Al/NFOWi9bONjOC/8tFtQvKDdz6Ou01Zbjn36H3XaHlKB3khItJEqkyPE8IVW/f/ c96jJONbqV0GZP6v5nXM =No9I -----END PGP SIGNATURE-----
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