Thanks! On Tue Feb 03 2015 at 4:21:08 AM Debian Bug Tracking System < ow...@bugs.debian.org> wrote:
> This is an automatic notification regarding your Bug report > which was filed against the bowtie package: > > #776881: bowtie: '-debug' binaries break `bowtie-build` > > It has been closed by Charles Plessy <ple...@debian.org>. > > Their explanation is attached below along with your original report. > If this explanation is unsatisfactory and you have not received a > better one in a separate message then please contact Charles Plessy < > ple...@debian.org> by > replying to this email. > > > -- > 776881: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=776881 > Debian Bug Tracking System > Contact ow...@bugs.debian.org with problems > > > > ---------- Forwarded message ---------- > From: Charles Plessy <ple...@debian.org> > To: 776881-cl...@bugs.debian.org > Cc: > Date: Tue, 03 Feb 2015 03:19:00 +0000 > Subject: Bug#776881: fixed in bowtie 1.1.1-2 > Source: bowtie > Source-Version: 1.1.1-2 > > We believe that the bug you reported is fixed in the latest version of > bowtie, which is due to be installed in the Debian FTP archive. > > A summary of the changes between this version and the previous one is > attached. > > Thank you for reporting the bug, which will now be closed. If you > have further comments please address them to 776...@bugs.debian.org, > and the maintainer will reopen the bug report if appropriate. > > Debian distribution maintenance software > pp. > Charles Plessy <ple...@debian.org> (supplier of updated bowtie package) > > (This message was generated automatically at their request; if you > believe that there is a problem with it please contact the archive > administrators by mailing ftpmas...@ftp-master.debian.org) > > > -----BEGIN PGP SIGNED MESSAGE----- > Hash: SHA512 > > Format: 1.8 > Date: Tue, 03 Feb 2015 10:44:39 +0900 > Source: bowtie > Binary: bowtie bowtie-examples > Architecture: source amd64 all > Version: 1.1.1-2 > Distribution: unstable > Urgency: high > Maintainer: Debian Med Packaging Team <debian-med-packaging@lists. > alioth.debian.org> > Changed-By: Charles Plessy <ple...@debian.org> > Description: > bowtie - Ultrafast memory-efficient short read aligner > bowtie-examples - Examples for bowtie, the ultrafast memory-efficient > short read al > Closes: 776881 > Changes: > bowtie (1.1.1-2) unstable; urgency=high > . > * Team upload. > * Install missing commands. Closes: #776881. > Checksums-Sha1: > 07a28a0af4b78bbdf722ad8cc22dfd44e30420cd 2195 bowtie_1.1.1-2.dsc > 0e26e94bbc417620c580061503abd54397176224 13064 > bowtie_1.1.1-2.debian.tar.xz > 98a40fd8f05f9131be1e772558b0e3f08696fc46 1369362 bowtie_1.1.1-2_amd64.deb > 2b586fc20f2f2c8654b7fc48624e5083a82ce241 6307360 > bowtie-examples_1.1.1-2_all.deb > Checksums-Sha256: > 44f5af7bdedfc5330c004b37f3c014ecbefe5d290a593eb9b6e4be8d639897ed 2195 > bowtie_1.1.1-2.dsc > bc6ee5fa83667e6e042b750b88eedfa770276713892610df06f5a6cf79f81ea3 13064 > bowtie_1.1.1-2.debian.tar.xz > bd176deb2caea1b3a7088724e6c308cb6b7b13aa36951be97de98109514be253 1369362 > bowtie_1.1.1-2_amd64.deb > a77dd074cecef4dce1b1cb8aa021bafdeb7c90211c315f759a83ed4a8ccd255d 6307360 > bowtie-examples_1.1.1-2_all.deb > Files: > 2210cbccf2207c970495ee228d0629ba 2195 science optional bowtie_1.1.1-2.dsc > 2a35d285f03c48d7619f40c198551720 13064 science optional > bowtie_1.1.1-2.debian.tar.xz > 116b8244f07442931ce4aaff2f910f0c 1369362 science optional > bowtie_1.1.1-2_amd64.deb > 1067dde15b877c86092bbee12bebef3c 6307360 science optional > bowtie-examples_1.1.1-2_all.deb > > -----BEGIN PGP SIGNATURE----- > Version: GnuPG v1 > > iQIcBAEBCgAGBQJU0DKhAAoJEMW9bI8ildUCbQ0QAJ147vfy4ZzeMyVFKkUpO2Kr > 1CFNpMzun1J3qRokRwcB+bkdrK7PptsBF5iBlWO5p5cWL5E8CUE2lpkKlyPMudzU > qUEQSJy0/f+v+HDDfsqVO38vp4OHa9byaOkOFrx02idsxhkxLJO2jUfaLGvlaT3k > 1CtJOpWEcvE9FEIxXNWLcguBO/LKB4uRwijsIo15UT/r9XAl3lktWZxVcn3D/aOC > dbNz773QDzzmucFgf9NHzaownqEz5SmwnFUZWPnIMbTR2sCGLpRUu9xl8vlz/i1/ > 3Mt5O45xJbnGIi+FaXLJt6gjyap0eMHtFkG+arIynqkOg8KdkQWR3p0epx2QiZWz > ynnljuDiTtINirqy2phOW3MSF3bDl9AvJonNk4x9OnbugyY5j2xW6Pm540lshLlr > A3EUid+5bx+7HjWnRL8ghFTmtOj3JBeiQkzZ05NBU21PFJmBoVEIjX3qmhmkdZT+ > sVOBvm5mGATdM8wAM4PUWHHbJhibuHGQD0lGc2OOdKvkLmfMA+63TFsyugYG1Nuf > QDtO/Sb4/GR+U8E85yMT/viylrGckB2RbR+1Wo3fOT0CzyD46WUfCG8/F2pXq631 > QwAuG6zggjxTmQryTxciKvJ+907UGDU4GKcrApG16ApRbw+dNQQLZB/TXyh5Ktii > gnr5JgXiXaJjK8swvXvH > =vGNd > -----END PGP SIGNATURE----- > > > ---------- Forwarded message ---------- > From: "Michael R. Crusoe" <michael.cru...@gmail.com> > To: Debian Bug Tracking System <sub...@bugs.debian.org> > Cc: > Date: Mon, 02 Feb 2015 20:14:46 +0000 > Subject: bowtie: '-debug' binaries break `bowtie-build` > Package: bowtie > Version: 1.1.1-1 > Severity: grave > Justification: renders package unusable > > > Hello, > > Looks like the debug versions of 'bowtie-build-l' and 'bowtie-build-s' are > present instead thus breaking the 'bowtie-build' wrapper making the package > useless. > > > > -- System Information: > Debian Release: 8.0 > APT prefers unstable > APT policy: (500, 'unstable') > Architecture: amd64 (x86_64) > > Kernel: Linux 3.13.0-44-generic (SMP w/12 CPU cores) > Locale: LANG=C, LC_CTYPE=C (charmap=ANSI_X3.4-1968) (ignored: LC_ALL set > to C) > Shell: /bin/sh linked to /bin/dash > Init: unable to detect > > Versions of packages bowtie depends on: > ii libc6 2.19-14 > ii libgcc1 1:4.9.2-10 > ii libstdc++6 4.9.2-10 > ii python 2.7.8-2 > > bowtie recommends no packages. > > Versions of packages bowtie suggests: > pn bowtie-examples <none> > > -- no debconf information >
