Your message dated Tue, 08 Dec 2015 22:05:10 +0000 with message-id <e1a6qni-0001mi...@franck.debian.org> and subject line Bug#807423: fixed in altree 1.3.1-3 has caused the Debian Bug report #807423, regarding altree: FTBFS with perl 5.22 in experimental (MakeMaker changes) to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 807423: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=807423 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: altree Version: 1.3.1-2 Severity: serious Justification: transition imminent User: debian-p...@lists.debian.org Usertags: perl-5.22-transition makemaker-prefix Tags: sid stretch This package FTBFS with perl 5.22.0-2, which removed support for a long- obsolete way of overriding PREFIX when calling 'make install' with ExtUtils::MakeMaker, as described in the lintian tag debian-rules-makemaker-prefix-is-deprecated[1] and the Debian Perl policy[2]: Files found in blib/arch: installing files in blib/lib into architecture depende nt library tree !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ERROR: Can't create '/usr/bin' Do not have write permissions on '/usr/bin' !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! at -e line 1. Makefile:864: recipe for target 'pure_vendor_install' failed make[2]: *** [pure_vendor_install] Error 13 The fix is to use DESTDIR instead of PREFIX; please see the lintian description for examples. Alternatively, newer versions of debhelper can automatically call make install with the correct arguments when using the dh7 style rules files. The perl 5.22 is due to start this week, so apologies for the late submission of this bug; for some reason my previous testing of this issue overlooked this package. Cheers, Dominic. [1] <https://lintian.debian.org/tags/debian-rules-makemaker-prefix-is-deprecated.html> [2] <https://www.debian.org/doc/packaging-manuals/perl-policy/ch-module_packages.html#s-vendor_install>
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--- Begin Message ---Source: altree Source-Version: 1.3.1-3 We believe that the bug you reported is fixed in the latest version of altree, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 807...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Vincent Danjean <vdanj...@debian.org> (supplier of updated altree package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Tue, 08 Dec 2015 20:47:26 +0100 Source: altree Binary: altree altree-examples Architecture: all amd64 source Version: 1.3.1-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Vincent Danjean <vdanj...@debian.org> Closes: 807173 807423 Description: altree-examples - example files for ALTree altree - program to perform phylogeny-based association and localization a Changes: altree (1.3.1-3) unstable; urgency=medium . * [debian/control] Update build dependencies for GSL 2, change libgsl0-dev to libgsl-dev. Thanks Bas Couwenberg <sebas...@debian.org> (Closes: #807173) * Fix "FTBFS with perl 5.22 in experimental (MakeMaker changes)" by removing manual (wrong) call to "make install PREFIX=..." (Closes: #807423) * [debian/control] Bump Standards-Version (no changes needed) Checksums-Sha1: 671cd0fe82d38016dd4426b65419af7bac8370d1 2275 altree_1.3.1-3.dsc c1735cacc20ccc3c1496cde8ad664482f6e4ceed 5724 altree_1.3.1-3.debian.tar.xz 99bf4e799d858bdeecf60e162d7c0c66db227652 330614 altree-examples_1.3.1-3_all.deb 86bcb4a0707fd0e40ee4ed6f49e10aa62d6a590b 270188 altree_1.3.1-3_amd64.deb Checksums-Sha256: c886e3466785d92e981687d2c4dd752a467b015d8607bf029ec831ea742da3ea 2275 altree_1.3.1-3.dsc de956d70aabba28da1f832e49fb085b8482c7263a32981966d4b6e503c4cc79f 5724 altree_1.3.1-3.debian.tar.xz 8aac405ec42ca8df968279372c8d3dc3a09bbd3f529e22635dbff9fbe176fa62 330614 altree-examples_1.3.1-3_all.deb 4191b4cc23985a14d91d66d900497c468ee45e4349a2efb1be6da2af0f32670d 270188 altree_1.3.1-3_amd64.deb Files: 54f86632872e5fbe1dfe2db942d0c2d8 2275 science optional altree_1.3.1-3.dsc 7b3b11702e46bc5c175c16462911e8c5 5724 science optional altree_1.3.1-3.debian.tar.xz 947e619331b7355687dd41a995f9872a 330614 science optional altree-examples_1.3.1-3_all.deb 59aa5f3f2763163078141eba6bfbdc8c 270188 science optional altree_1.3.1-3_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIVAwUBVmc5U5ZH3mN+x7dRAQiyqQ/9HE6azd7XRJV2ii6M6kodV/lckRj+OEaZ nqITSaEWYAtOB+I4Z/bm4xWXaaQQCeOCYUGfoMitIoeVGewHD0aAPHc3OGFGWBpk Uplz2jbEkzObn7UoBVw5U0672oqkPlPCYEy2NUxOMZEMbEdVk0zJ1sMqcKb051Xp /api6vULoA4dV7Agzy+QKHSmxr4roLbq9g68Y3w5dgfn9jqNZwYV8ktuZga8oOoe 17KB++8lgVWKLmd5oTt0Bpki0fRBBoAzSg3rruOL2PbNY67Qe3xRC1+WanEruWiG UFO7k89e+1YUbIh87d8t1IHKMWsoAk9SE/aZn/r+UWlTC2dmH8MNrLj0oh7Uel/z ldaijrci9yKkoby8pwmztnqcKLv0HYEqHyZE1VHNeDVicohrRl0jBIDhZrR/Ebrn ffIsqfmiGP9a1b8Ama74VLwnZqPWqmHm6gjenXUT0P9Gddy7cKiIb+SdKRP+UcLA gBaEQdyCpa3X/Z9tvx9vtXF/G0wG7b9HRe7l/Oo5cYBS91jLEhIiD9z8vVHlelsv nFTtH9pgjOkdFA1lg4uzUtvzWsAvlvKtb6e4ztBBFWvTVkQps6JtNiIEXntXQhGS w2drfVG42xYJZlQE+Z26YjdojuDb2OF6y5LbFf1c5OyprxZGWGAkCYph+rfX3rdr IkQ5nMfsvwU= =nkZA -----END PGP SIGNATURE-----
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