Source: molds Version: 0.3.1-1 Severity: serious Justification: fails to build from source User: reproducible-bui...@lists.alioth.debian.org Usertags: ftbfs X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org
Dear Maintainer,
molds fails to build from source in unstable/amd64:
[..]
mpicxx -I/usr/include/mpi -I/usr/lib/openblas-base//include/ -o
obj/OptimizerFactory.o base/factories/OptimizerFactory.cpp -g -Wall -fopenmp
-O2 -fopenmp -c
mpicxx -I/usr/include/mpi -I/usr/lib/openblas-base//include/ -o obj/MolDS.o
base/MolDS.cpp -g -Wall -fopenmp -O2 -fopenmp -c
mpicxx -I/usr/include/mpi -I/usr/lib/openblas-base//include/ -o obj/Main.o
Main.cpp -g -Wall -fopenmp -O2 -fopenmp -c
mpicxx -o molds -Wl,-rpath=/usr//lib/ -Wl,-rpath=/usr/lib/openblas-base
obj/Enums.o obj/PrintController.o obj/MolDSException.o
obj/MallocerFreer.o
obj/MpiProcess.o obj/AsyncCommunicator.o obj/Blas.o
obj/Lapack.o obj/Utilities.o obj/MathUtilities.o obj/EularAngle.o
obj/Parameters.o obj/Atom.o obj/Hatom.o obj/Liatom.o
obj/Catom.o obj/Natom.o obj/Oatom.o
obj/Satom.o obj/EnvironmentalPointCharge.o
obj/AtomFactory.o obj/Molecule.o obj/InputParser.o
obj/GTOExpansionSTO.o obj/RealSphericalHarmonicsIndex.o
obj/MOLogger.o obj/DensityLogger.o
obj/HoleDensityLogger.o obj/ParticleDensityLogger.o
obj/Cndo2.o obj/Indo.o
obj/ZindoS.o obj/Mndo.o obj/Am1.o obj/Am1D.o obj/Pm3.o obj/Pm3D.o
obj/Pm3Pddg.o obj/ElectronicStructureFactory.o obj/MD.o obj/MC.o
obj/RPMD.o obj/NASCO.o obj/Optimizer.o
obj/ConjugateGradient.o obj/SteepestDescent.o obj/BFGS.o
obj/GEDIIS.o obj/OptimizerFactory.o obj/MolDS.o
obj/Main.o -L/usr//lib/ -L/usr/lib/openblas-base -lstdc++ -lm -lpthread -lgomp
-L/usr/lib/lapack/ -llapacke -lmpi -lmpi_cxx -lboost_serialization -lboost_mpi
-lboost_thread -lboost_system -lopenblas
/usr//lib//liblapacke.so: undefined reference to `cgejsv_'
/usr//lib//liblapacke.so: undefined reference to `zggsvd3_'
/usr//lib//liblapacke.so: undefined reference to `cggsvd3_'
/usr//lib//liblapacke.so: undefined reference to `sgghd3_'
/usr//lib//liblapacke.so: undefined reference to `cggev3_'
/usr//lib//liblapacke.so: undefined reference to `zgghd3_'
/usr//lib//liblapacke.so: undefined reference to `cgges3_'
/usr//lib//liblapacke.so: undefined reference to `cgetrf2_'
/usr//lib//liblapacke.so: undefined reference to `zgesvj_'
/usr//lib//liblapacke.so: undefined reference to `dgetrf2_'
/usr//lib//liblapacke.so: undefined reference to `cggsvp3_'
/usr//lib//liblapacke.so: undefined reference to `zggsvp3_'
/usr//lib//liblapacke.so: undefined reference to `sggev3_'
/usr//lib//liblapacke.so: undefined reference to `zggev3_'
/usr//lib//liblapacke.so: undefined reference to `zgesvdx_'
/usr//lib//liblapacke.so: undefined reference to `spotrf2_'
/usr//lib//liblapacke.so: undefined reference to `sgges3_'
/usr//lib//liblapacke.so: undefined reference to `sgetrf2_'
/usr//lib//liblapacke.so: undefined reference to `cgesvdx_'
/usr//lib//liblapacke.so: undefined reference to `zpotrf2_'
/usr//lib//liblapacke.so: undefined reference to `dggsvd3_'
/usr//lib//liblapacke.so: undefined reference to `dgghd3_'
/usr//lib//liblapacke.so: undefined reference to `dggev3_'
/usr//lib//liblapacke.so: undefined reference to `zgejsv_'
/usr//lib//liblapacke.so: undefined reference to `sbdsvdx_'
/usr//lib//liblapacke.so: undefined reference to `dpotrf2_'
/usr//lib//liblapacke.so: undefined reference to `sggsvp3_'
/usr//lib//liblapacke.so: undefined reference to `dgesvdx_'
/usr//lib//liblapacke.so: undefined reference to `dgges3_'
/usr//lib//liblapacke.so: undefined reference to `zgges3_'
/usr//lib//liblapacke.so: undefined reference to `dbdsvdx_'
/usr//lib//liblapacke.so: undefined reference to `zgetrf2_'
/usr//lib//liblapacke.so: undefined reference to `cgesvj_'
/usr//lib//liblapacke.so: undefined reference to `sgesvdx_'
/usr//lib//liblapacke.so: undefined reference to `sggsvd3_'
/usr//lib//liblapacke.so: undefined reference to `dggsvp3_'
/usr//lib//liblapacke.so: undefined reference to `cpotrf2_'
/usr//lib//liblapacke.so: undefined reference to `cgghd3_'
collect2: error: ld returned 1 exit status
Makefile_GNU:43: recipe for target 'molds' failed
make[2]: *** [molds] Error 1
make[2]: Leaving directory
'/home/lamby/temp/cdt.20160107143305.87JDA1KenV/molds-0.3.1/src'
debian/rules:31: recipe for target 'override_dh_auto_build' failed
make[1]: *** [override_dh_auto_build] Error 2
make[1]: Leaving directory
'/home/lamby/temp/cdt.20160107143305.87JDA1KenV/molds-0.3.1'
debian/rules:24: recipe for target 'build' failed
make: *** [build] Error 2
[..]
The full build log is attached.
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
`-
molds.0.3.1-1.unstable.amd64.log.txt.gz
Description: Binary data
