Your message dated Mon, 11 Jan 2016 04:24:15 +0000
with message-id <e1aiu1f-0002nm...@franck.debian.org>
and subject line Bug#810357: fixed in r-base 3.2.3-2
has caused the Debian Bug report #810357,
regarding R crashes with "Illegal instruction" on mips
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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immediately.)
--
810357: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=810357
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: r-base-core
Version: 3.2.3-1
Severity: grave
Control: affects -1 r-cran-ncdf4 r-cran-afex r-cran-coin r-cran-scales
r-cran-ape r-cran-rms r-cran-timeseries r-cran-dosefinding r-cran-maps
r-cran-statmod
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Hi Dirk,
R crashes at startup with an "Illegal instruction" (tested on minkus, the mips
porterbox):
(sid_mips-dchroot)sebastien@minkus:~$ R
Illegal instruction
Here is a backtrace:
#0 machar (ibeta=0x77fc3bd0 <R_AccuracyInfo>, it=0x77fc3bd4
<R_AccuracyInfo+4>, irnd=0x77fc3bd8 <R_AccuracyInfo+8>, ngrd=0x77fc3bdc
<R_AccuracyInfo+12>, machep=0x77fc3be0 <R_AccuracyInfo+16>,
negep=0x77fc3be4 <R_AccuracyInfo+20>, iexp=0x77fc3be8 <R_AccuracyInfo+24>,
minexp=0x77fc3bec <R_AccuracyInfo+28>, maxexp=0x77fc3bf0 <R_AccuracyInfo+32>,
eps=0x77fc3bf8 <R_AccuracyInfo+40>,
epsneg=0x77fc3c00 <R_AccuracyInfo+48>, xmin=0x77fc3c08 <R_AccuracyInfo+56>,
xmax=0x77fc3c10 <R_AccuracyInfo+64>) at platform.c:3199
#1 0x77d1a570 in Init_R_Machine (rho=0x43054c) at platform.c:61
#2 0x77d1b48c in Init_R_Variables (rho=0x43054c) at platform.c:198
#3 0x77cf0198 in setup_Rmainloop () at main.c:840
#4 0x77cf0dfc in Rf_mainloop () at main.c:1012
#5 0x00400a00 in main (ac=1, av=0x7fff6574) at Rmain.c:29
#6 0x779b9f58 in __libc_start_main () from /lib/mips-linux-gnu/libc.so.6
#7 0x00400870 in _ftext ()
Incidentally, all CRAN packages FTBFS on mips (see above for the list of
currently affected packages).
Cheers,
- --
.''`. Sébastien Villemot
: :' : Debian Developer
`. `' http://sebastien.villemot.name
`- GPG Key: 4096R/381A7594
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--- End Message ---
--- Begin Message ---
Source: r-base
Source-Version: 3.2.3-2
We believe that the bug you reported is fixed in the latest version of
r-base, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 810...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Dirk Eddelbuettel <e...@debian.org> (supplier of updated r-base package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Sun, 10 Jan 2016 21:22:03 -0600
Source: r-base
Binary: r-base r-base-core r-base-dev r-mathlib r-base-html r-doc-pdf
r-doc-html r-doc-info r-recommended r-base-core-dbg
Architecture: source amd64 all
Version: 3.2.3-2
Distribution: unstable
Urgency: low
Maintainer: Dirk Eddelbuettel <e...@debian.org>
Changed-By: Dirk Eddelbuettel <e...@debian.org>
Description:
r-base - GNU R statistical computation and graphics system
r-base-core - GNU R core of statistical computation and graphics system
r-base-core-dbg - GNU R debug symbols for statistical comp. language and
environmen
r-base-dev - GNU R installation of auxiliary GNU R packages
r-base-html - GNU R html docs for statistical computing system functions
r-doc-html - GNU R html manuals for statistical computing system
r-doc-info - GNU R info manuals statistical computing system
r-doc-pdf - GNU R pdf manuals for statistical computing system
r-mathlib - GNU R standalone mathematics library
r-recommended - GNU R collection of recommended packages [metapackage]
Closes: 810357
Changes:
r-base (3.2.3-2) unstable; urgency=low
.
[ Sébastien Villemot ]
* Use gcc-4.9 to compile C code on mips, as a workaround to a gcc-5 bug.
(Closes: #810357).
* Enable back optimization flags on mips and mipsel.
.
[ Dirk Eddelbuettel ]
* debian/control: Use Sebastien's patch and add gcc-4.9 for mips
* debian/rules: Use Sebastien's patch and enforce gcc-4.9 for mips, also
comment-out remaining suppression of optmization
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